ggKbase home page

rifcsphigho2_02_scaffold_36387_5

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: 4109..4513

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 135.0
  • Bit_score: 168
  • Evalue 5.10e-39
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 128.0
  • Bit_score: 142
  • Evalue 2.80e-31
rpl10e; 50S ribosomal protein L10e similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 134.0
  • Bit_score: 131
  • Evalue 1.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR16 → Archaea

Sequences

DNA sequence
Length: 405
ATGGGAGAGCAAAGAACAGACTATCAATATACTCTTAACTTATTGTCAAAAGAAGATTTACAGATCCGCGCAAATGCTTTTGAGAGCGCAAGACAGACTTCTAACAAAGTAATGGAAGAAGTGCTTGGAAAAGCAGGCTATTTCATCCAGATAAGAAAATATCCACATCATATTCTAAGAGAGAATCCATTAGCTTCTGGCGCAGGCGCAGATAGAATGAGCACAGGTATGGCTGGCGCATTTGGAAATCCAATAGGCCATGCTGCACAAGTAAGACGAGGAGAAGCATTATTTACTGTCAAAGTTAATAAAAAAGATTTAGAGCTTGCAAAAAAAGCATTGCATAGGGCAGCTTACAAGCTTCCAAAATCTTGCTTCATTGAAGTAGTTGAGAATAAGAAGTGA
PROTEIN sequence
Length: 135
MGEQRTDYQYTLNLLSKEDLQIRANAFESARQTSNKVMEEVLGKAGYFIQIRKYPHHILRENPLASGAGADRMSTGMAGAFGNPIGHAAQVRRGEALFTVKVNKKDLELAKKALHRAAYKLPKSCFIEVVENKK*