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rifcsphigho2_02_scaffold_36387

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_36387_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..174)
-----------------
DNA (174bp)
protein (58aa)
id=5048622 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_36387_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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288..1007
-----------------
DNA (720bp)
protein (240aa)
ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=5048624 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter-like protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_36387_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1101..2465
-----------------
DNA (1365bp)
protein (455aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467N7_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ72702.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
rifcsphigho2_02_scaffold_36387_4
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2490..3755
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382730D
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AAM06546.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methano
rifcsphigho2_02_scaffold_36387_5

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4109..4513
-----------------
DNA (405bp)
protein (135aa)
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl10e; 50S ribosomal protein L10e
rifcsphigho2_02_scaffold_36387_6
unknown

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comp(4775..5596)
-----------------
DNA (822bp)
protein (274aa)

This feature has no annotations

rifcsphigho2_02_scaffold_36387_7

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5742..6260
-----------------
DNA (519bp)
protein (173aa)
Cytochrome c-type biogenesis protein {ECO:0000313|EMBL:KHO45308.1}; EC=4.4.1.17 {ECO:0000313|EMBL:KHO45308.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5048645 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cytochrome c-type biogenesis protein (EC:4.4.1.17)
rifcsphigho2_02_scaffold_36387_8
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

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6290..6754
-----------------
DNA (465bp)
protein (155aa)
AhpC/TSA family protein {ECO:0000313|EMBL:KKT92392.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
thiol-disulfide isomerase id=15190466 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
thiol-disulfide isomerase
Displaying 8 items

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