ggKbase home page

rifcsphigho2_02_scaffold_100095_8

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(3238..3555)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S12H4_L00950 {ECO:0000313|EMBL:GAI82646.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 105.0
  • Bit_score: 147
  • Evalue 1.20e-32
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 107.0
  • Bit_score: 138
  • Evalue 4.10e-30
DNA-directed RNA polymerase subunit M similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 119.0
  • Bit_score: 108
  • Evalue 1.70e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 318
ATGTTATTTTGCCCAAAATGCAGCTCAATACTTAAGCCAAAGAAAACAGGCAGCAAGACAGTCATGGCATGTAGCTGCGGCTATACAAGCAGCGATACAAGCTCAGCAAAAATGACTGAAGCTGTCAAAAATAATAATGCTAAAGTTGAGGTTGTTGAGAAGGATTTCCAGGCAATGCCTCTAGTGCCAAATAAATGCTCAAAATGCAATCATGGAAAAGCATATTACTGGGAAATCCAGACAAGGGCAAGCGATGAGCCAGCGACAAGATTCTATAAGTGCGAGAAATGCCAGCATGTCTGGAGAGAGTATAAATGA
PROTEIN sequence
Length: 106
MLFCPKCSSILKPKKTGSKTVMACSCGYTSSDTSSAKMTEAVKNNNAKVEVVEKDFQAMPLVPNKCSKCNHGKAYYWEIQTRASDEPATRFYKCEKCQHVWREYK*