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rifcsphigho2_02_scaffold_6754

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_6754_1
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3..206
-----------------
DNA (204bp)
protein (68aa)
rifcsphigho2_02_scaffold_6754_2
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

365..628
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0997
hypothetical protein
rifcsphigho2_02_scaffold_6754_16S_1
unknown

Not on your lists

comp(4403..5163)
-----------------
DNA (761bp)
rifcsphigho2_02_scaffold_6754_3
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4523..4966
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein
# 7749 # 8204 # 1 # ;gc_cont=0.581 id=18311228 bin=Haloredivivus tax=Haloredivivus
rifcsphigho2_02_scaffold_6754_16S_2
unknown

Not on your lists

comp(5235..5967)
-----------------
DNA (733bp)
rifcsphigho2_02_scaffold_6754_4
unknown

Not on your lists

6843..7163
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_5
unknown

Not on your lists

comp(7155..7562)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_trna_3
unknown

Not on your lists

comp(7954..8023)
-----------------
DNA (70bp)
transferRNA
rifcsphigho2_02_scaffold_6754_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8087..9307)
-----------------
DNA (1221bp)
protein (407aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
rifcsphigho2_02_scaffold_6754_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9310..9741)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A12F9
Prefoldin subunit alpha
rifcsphigho2_02_scaffold_6754_8
unknown

Not on your lists

comp(9754..9933)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10054..10791)
-----------------
DNA (738bp)
protein (246aa)
condensin subunit ScpA; K05896 segregation and condensation protein A id=5048743 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Chromosome segregation and condensation protein ScpA
rifcsphigho2_02_scaffold_6754_trna_2
unknown

Not on your lists

comp(10932..11046)
-----------------
DNA (115bp)
transferRNA
rifcsphigho2_02_scaffold_6754_10
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11446..12432
-----------------
DNA (987bp)
protein (329aa)
Fic domain-containing protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VI9_METBU
filamentation induced by cAMP protein Fic
rifcsphigho2_02_scaffold_6754_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12574..13521)
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003704509
trypsin-like serine protease
rifcsphigho2_02_scaffold_6754_12
unknown

Not on your lists

comp(13559..13795)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_13
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13934..14686)
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSH6_METAC
hypothetical protein
rifcsphigho2_02_scaffold_6754_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

14870..15682
-----------------
DNA (813bp)
protein (271aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=5097762 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
prolipoprotein diacylglyceryl transferase
rifcsphigho2_02_scaffold_6754_15

Not on your lists

15712..16350
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1JLS1_GUITH id=5087234 bin=GWF1_OP11_31_35_complete species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein
rifcsphigho2_02_scaffold_6754_trna_1
unknown

Not on your lists

comp(16872..16944)
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_6754_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


17090..18865
-----------------
DNA (1776bp)
protein (592aa)
BSCG--tRNA--synthetase--alanyl
Alanine--tRNA ligase id=3982324 bin=GWF2_Lentisphaerae_49_21 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Alanine-tRNA ligase
rifcsphigho2_02_scaffold_6754_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18900..20150)
-----------------
DNA (1251bp)
protein (417aa)
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_6754_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20340..21371
-----------------
DNA (1032bp)
protein (344aa)
hypothetical protein
Phosphoesterase, DHHA1 id=5044037 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_6754_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


21790..22245
-----------------
DNA (456bp)
protein (152aa)
ASCG--Ribosomal--protein--S15
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps15p; 30S ribosomal protein S15
rifcsphigho2_02_scaffold_6754_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22429..24483
-----------------
DNA (2055bp)
protein (685aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
rifcsphigho2_02_scaffold_6754_21
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

24459..24854
-----------------
DNA (396bp)
protein (132aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Uncharacterized protein id=5799602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6754_22
unknown

Not on your lists

24997..25308
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_23
unknown

Not on your lists

25305..25679
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_24
unknown

Not on your lists

comp(25666..26205)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6754_25
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(26192..26755)
-----------------
DNA (564bp)
protein (188aa)
Nitroreductase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQF0_THELI
nitroreductase
Displaying items 1-30 of 44 in total

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