ggKbase home page

rifcsphigho2_02_scaffold_5739

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_5739_1
unknown

Not on your lists

comp(3..266)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5739_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(292..1047)
-----------------
DNA (756bp)
protein (252aa)
PHP-like protein id=3345387 bin=GWF2_Lentisphaerae_50_93 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rifcsphigho2_02_scaffold_5739_3
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1114..1740)
-----------------
DNA (627bp)
protein (209aa)
tdk; Thymidine kinase (EC:2.7.1.21)
Thymidine kinase id=1933379 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
rifcsphigho2_02_scaffold_5739_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2103..3302
-----------------
DNA (1200bp)
protein (400aa)
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_5739_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3311..3697)
-----------------
DNA (387bp)
protein (129aa)
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
rifcsphigho2_02_scaffold_5739_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3841..4284)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PV24_METTM id=5103011 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_5739_7

Not on your lists

comp(4320..4955)
-----------------
DNA (636bp)
protein (212aa)
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_02_scaffold_5739_8

Not on your lists


5195..6691
-----------------
DNA (1497bp)
protein (499aa)
ASCG--Glycyl-tRNA--synthetase
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B52A0
hypothetical protein
rifcsphigho2_02_scaffold_5739_9
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


6695..7969
-----------------
DNA (1275bp)
protein (425aa)
BSCG--tRNA--synthetase--aspartyl
Aspartate--tRNA ligase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VST0_METIM id=5103862 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Aspartate-tRNA ligase
rifcsphigho2_02_scaffold_5739_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8150..10369)
-----------------
DNA (2220bp)
protein (740aa)
hypothetical protein id=5048511 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_5739_11

Not on your lists

comp(10551..12911)
-----------------
DNA (2361bp)
protein (787aa)
hypothetical protein id=5048512 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_5739_12

Not on your lists

13095..13619
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
id=5048513 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_5739_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13838..14134)
-----------------
DNA (297bp)
protein (99aa)
id=5049666 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_5739_14
unknown

Not on your lists

comp(14387..15118)
-----------------
DNA (732bp)
protein (244aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5739_15
unknown

Not on your lists

comp(15383..15991)
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5739_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

16307..16861
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein
Putative uncharacterized protein id=5043754 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5739_17
unknown

Not on your lists

comp(16950..17261)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

Displaying 17 items

View Taxonomy