ggKbase home page

rifcsphigho2_02_scaffold_13200

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_13200_1
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

2..661
-----------------
DNA (660bp)
protein (220aa)
Transposase DDE domain protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6R4_METCZ
tnp-7; transposase DDE domain-containing protein
rifcsphigho2_02_scaffold_13200_2
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

774..1337
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein id=129929 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
rifcsphigho2_02_scaffold_13200_3
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

1349..2020
-----------------
DNA (672bp)
protein (224aa)
rifcsphigho2_02_scaffold_13200_4
R_OP11_Daviesbacteria_44_29, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2022..3374
-----------------
DNA (1353bp)
protein (451aa)
seg 10..19 id=129932 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
rifcsphigho2_02_scaffold_13200_5
unknown

Not on your lists

3811..4146
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13200_6
unknown

Not on your lists

comp(4177..4386)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13200_7
unknown

Not on your lists

4884..5396
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13200_8
unknown

Not on your lists

comp(5434..6087)
-----------------
DNA (654bp)
protein (218aa)
Metallopeptidase, family M24 n=11 Tax=Clostridium perfringens RepID=Q0TMF6_CLOP1 id=5103873 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metallopeptidase, family M24
rifcsphigho2_02_scaffold_13200_9
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6100..7071)
-----------------
DNA (972bp)
protein (324aa)
Pyruvate:ferredoxin oxidoreductase, beta subunit n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TZ56_METKA
PorB_1; pyruvate ferredoxin oxidoreductase subunit beta
rifcsphigho2_02_scaffold_13200_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(7151..8290)
-----------------
DNA (1140bp)
protein (380aa)
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate synthase alpha subunit n=1 Tax=planctomycete KSU-1 RepID=I3IRB3_9PLAN
rifcsphigho2_02_scaffold_13200_11
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(8290..8571)
-----------------
DNA (282bp)
protein (94aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3V3_THEGP
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
rifcsphigho2_02_scaffold_13200_12
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(8588..9115)
-----------------
DNA (528bp)
protein (176aa)
Pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HNR3_PYRSN
pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma
rifcsphigho2_02_scaffold_13200_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9367..9885)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035C462D
rifcsphigho2_02_scaffold_13200_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9869..10486)
-----------------
DNA (618bp)
protein (206aa)
DNA polymerase beta domain protein region id=3464821 bin=PER_GWC2_41_7 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_13200_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10742..11674
-----------------
DNA (933bp)
protein (311aa)
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UX5_METBU
rifcsphigho2_02_scaffold_13200_16
unknown

Not on your lists

11675..12100
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13200_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12102..13106
-----------------
DNA (1005bp)
protein (335aa)
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E896_METMS rbh
Orn/DAP/Arg decarboxylase 2
Displaying 17 items

View Taxonomy