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rifcsphigho2_02_scaffold_12683

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12683_1
unknown

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comp(3..77)
-----------------
DNA (75bp)
protein (25aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12683_2
AR6, Pacearchaeaota, DPANN, Archaea

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comp(62..919)
-----------------
DNA (858bp)
protein (286aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=AR6
argD; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
argD; acetylornithine aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] id=5241609 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_12683_3
AR10, Diapherotrites, DPANN, Archaea

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comp(901..1314)
-----------------
DNA (414bp)
protein (138aa)
argD; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
argD; acetylornithine aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] id=5241609 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
argD; acetylornithine aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=AR10
rifcsphigho2_02_scaffold_12683_4
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(1353..2831)
-----------------
DNA (1479bp)
protein (493aa)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=CG_Pacearch_06
aldH; aldehyde dehydrogenase NAD+ (EC:1.2.1.3)
aldH; aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] id=5241608 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_12683_5

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comp(2894..3802)
-----------------
DNA (909bp)
protein (303aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] id=5240722 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1579370 species="Archaea.;" sour
rifcsphigho2_02_scaffold_12683_6

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comp(3799..5160)
-----------------
DNA (1362bp)
protein (454aa)
Uncharacterized protein n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VHE4_CLOAI
Marine sediment metagenome DNA, contig: S01H4_C00252 {ECO:0000313|EMBL:GAG68819.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Hypothetical protein
rifcsphigho2_02_scaffold_12683_7
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(5157..6071)
-----------------
DNA (915bp)
protein (305aa)
carbamate kinase-like carbamoyl phosphate synthetase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=CG_Pacearch_02
Carbamate kinase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGT0_ACIB4 id=5103487 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Carbamate kinase
rifcsphigho2_02_scaffold_12683_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

6122..7201
-----------------
DNA (1080bp)
protein (360aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA 3'-terminal phosphate cyclase Tax=AR15
rifcsphigho2_02_scaffold_12683_9
unknown

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comp(7311..7415)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12683_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7687..8118
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003824193
Uncharacterized protein {ECO:0000313|EMBL:KKC28309.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
rifcsphigho2_02_scaffold_12683_11

Not on your lists

8115..8960
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein id=5043706 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47022.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_12683_12
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8957..9475
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
hypothetical protein
rifcsphigho2_02_scaffold_12683_13
unknown

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9904..10017
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12683_14

Not on your lists

comp(9962..11293)
-----------------
DNA (1332bp)
protein (444aa)
Marine sediment metagenome DNA, contig: S12H4_L00873 {ECO:0000313|EMBL:GAI81613.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_12683_15
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(11290..11595)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F1C72
hypothetical protein Tax=CG_Pacearch_02
Displaying 15 items

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