ggKbase home page

rifcsphigho2_02_scaffold_2144

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_2144_1
unknown

Not on your lists

1..810
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_2
unknown

Not on your lists

824..2926
-----------------
DNA (2103bp)
protein (701aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_3
GWF2_OD1_41_16, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2929..3483
-----------------
DNA (555bp)
protein (185aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=5799539 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2144_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3562..4257
-----------------
DNA (696bp)
protein (232aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_2144_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4328..5422
-----------------
DNA (1095bp)
protein (365aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsphigho2_02_scaffold_2144_6

Not on your lists

5443..5646
-----------------
DNA (204bp)
protein (68aa)
Protein translocase SEC61 complex, gamma subunit id=5799593 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Preprotein translocase subunit Sss1
rifcsphigho2_02_scaffold_2144_7

Not on your lists


5649..6131
-----------------
DNA (483bp)
protein (161aa)
ASCG--Transcription--elongation--factor--Spt5
NusG antitermination factor id=5799592 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_2144_8

Not on your lists


6320..7057
-----------------
DNA (738bp)
protein (246aa)
BSCG--ribosomal--protein--L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L11
rifcsphigho2_02_scaffold_2144_9
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7047..8054)
-----------------
DNA (1008bp)
protein (336aa)
tRNA 2-selenouridine synthase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K8Q7_HALHC
tRNA 2-selenouridine synthase
rifcsphigho2_02_scaffold_2144_10

Not on your lists

comp(8141..8317)
-----------------
DNA (177bp)
protein (59aa)
rifcsphigho2_02_scaffold_2144_11
unknown

Not on your lists

comp(8507..8944)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_12
unknown

Not on your lists

comp(8947..10269)
-----------------
DNA (1323bp)
protein (441aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10248..13217)
-----------------
DNA (2970bp)
protein (990aa)
rifcsphigho2_02_scaffold_2144_14
unknown

Not on your lists

comp(13214..13315)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(13312..15399)
-----------------
DNA (2088bp)
protein (696aa)
phosphate/sulfate permease id=2175382 bin=GWA2_Bacteroidetes_42_15 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
rifcsphigho2_02_scaffold_2144_16
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15503..17446)
-----------------
DNA (1944bp)
protein (648aa)
ASCG--Methionyl-tRNA--synthetase
Methionine--tRNA ligase n=4 Tax=Thermoanaerobacter RepID=G2MVW8_9THEO
methionyl-tRNA synthetase
rifcsphigho2_02_scaffold_2144_17
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(17535..18368)
-----------------
DNA (834bp)
protein (278aa)
Endonuclease IV (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] id=5044914 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2144_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


18574..19008
-----------------
DNA (435bp)
protein (145aa)
ASCG--Ribosomal--protein--S6e
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S6e
rifcsphigho2_02_scaffold_2144_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


19062..20297
-----------------
DNA (1236bp)
protein (412aa)
ASCG--Translation--initiation--factor--IF-2--subunit--gamma
translation initiation factor 2 subunit gamma; K03242 translation initiation factor 2 subunit 3 id=5044023 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit gamma
rifcsphigho2_02_scaffold_2144_20

Not on your lists


20725..22008
-----------------
DNA (1284bp)
protein (428aa)
BSCG--tRNA--synthetase--Histidyl
Histidine--tRNA ligase id=5799824 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histidine-tRNA ligase
rifcsphigho2_02_scaffold_2144_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21992..22885)
-----------------
DNA (894bp)
protein (298aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2144_22
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

23334..25382
-----------------
DNA (2049bp)
protein (683aa)
peptidase S16, Lon-like protease (EC:3.4.21.53)
Peptidase S16, Lon-like protease n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHE5_ARCPA
rifcsphigho2_02_scaffold_2144_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

25379..26740
-----------------
DNA (1362bp)
protein (454aa)
ATP-dependent protease Lon id=5800666 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pab lon intein
rifcsphigho2_02_scaffold_2144_24

Not on your lists

comp(26742..27881)
-----------------
DNA (1140bp)
protein (380aa)
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
rifcsphigho2_02_scaffold_2144_25
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27972..29690
-----------------
DNA (1719bp)
protein (573aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760ED3
hypothetical protein
rifcsphigho2_02_scaffold_2144_26

Not on your lists

29725..30540
-----------------
DNA (816bp)
protein (272aa)
cell division inhibitor; K03609 septum site-determining protein MinD id=5045746 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_2144_27
unknown

Not on your lists

30545..30943
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_28
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(30936..32297)
-----------------
DNA (1362bp)
protein (454aa)
ASCG--Signal--recognition--particle--54--kDa--protein
Signal recognition particle 54 kDa protein id=5800735 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_2144_29
unknown

Not on your lists

comp(32394..32615)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2144_30

Not on your lists

comp(32612..33988)
-----------------
DNA (1377bp)
protein (459aa)
ribonuclease, putative id=5044955 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
trichohyalin
Displaying items 1-30 of 56 in total

View Taxonomy