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rifcsphigho2_02_scaffold_2163

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_2163_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

153..326
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C8A60
hypothetical protein
rifcsphigho2_02_scaffold_2163_2
unknown

Not on your lists

347..625
-----------------
DNA (279bp)
protein (93aa)
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO id=5103134 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-beta
rifcsphigho2_02_scaffold_2163_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(622..1812)
-----------------
DNA (1191bp)
protein (397aa)
sodium/hydrogen exchanger id=5048631 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
rifcsphigho2_02_scaffold_2163_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1815..2234)
-----------------
DNA (420bp)
protein (140aa)
CBS domain-containing protein id=5048630 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2163_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2251..3237)
-----------------
DNA (987bp)
protein (329aa)
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
N(2),N(2)-dimethylguanosine tRNA methyltransferase
rifcsphigho2_02_scaffold_2163_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3307..5058
-----------------
DNA (1752bp)
protein (584aa)
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
InfB_2; translation initiation factor IF-2
rifcsphigho2_02_scaffold_2163_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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5473..6309
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364BC2C
CRISPR-associated protein Cas4
rifcsphigho2_02_scaffold_2163_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6375..6635
-----------------
DNA (261bp)
protein (87aa)
PRC-barrel domain protein id=5800189 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PRC-barrel protein
rifcsphigho2_02_scaffold_2163_9
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7067..8359)
-----------------
DNA (1293bp)
protein (431aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VVA6_DESAS
rifcsphigho2_02_scaffold_2163_10
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8409..9845)
-----------------
DNA (1437bp)
protein (479aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J5J9_9FLAO
rifcsphigho2_02_scaffold_2163_11
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9838..11139)
-----------------
DNA (1302bp)
protein (434aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Clostridium sp. CAG:762 RepID=R5TD89_9CLOT
amidohydrolase
rifcsphigho2_02_scaffold_2163_12
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11158..11814)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036F4CB9
rifcsphigho2_02_scaffold_2163_13
unknown

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comp(11871..12107)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2163_14

Not on your lists

12217..13230
-----------------
DNA (1014bp)
protein (338aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit
rifcsphigho2_02_scaffold_2163_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13244..14209)
-----------------
DNA (966bp)
protein (322aa)
PROKAR_LIPOPROTEIN id=5041787 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2163_16

Not on your lists

comp(14224..15516)
-----------------
DNA (1293bp)
protein (431aa)
id=5046358 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2163_17
unknown

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comp(15550..16557)
-----------------
DNA (1008bp)
protein (336aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2163_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16554..19172)
-----------------
DNA (2619bp)
protein (873aa)
rifcsphigho2_02_scaffold_2163_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19257..20438)
-----------------
DNA (1182bp)
protein (394aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2163_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


20521..21579
-----------------
DNA (1059bp)
protein (353aa)
ASCG--Protein--pelota--homolog
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cell division protein
rifcsphigho2_02_scaffold_2163_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

21804..22598
-----------------
DNA (795bp)
protein (265aa)
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2163_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(22688..23818)
-----------------
DNA (1131bp)
protein (377aa)
Peptidyl-prolyl cis-trans isomerase PpiD (EC:5.2.1.8)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036F4B77
rifcsphigho2_02_scaffold_2163_23

Not on your lists

23930..25282
-----------------
DNA (1353bp)
protein (451aa)
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_2163_24
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25337..26500)
-----------------
DNA (1164bp)
protein (388aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=3703452 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
rifcsphigho2_02_scaffold_2163_25
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(26506..27381)
-----------------
DNA (876bp)
protein (292aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase id=3178914 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
rifcsphigho2_02_scaffold_2163_26

Not on your lists

27464..28024
-----------------
DNA (561bp)
protein (187aa)
Predicted transcription regulator, containing CBS domains n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JGL2_PYRKO id=5102981 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative transcription regulator, containing CBS protein
rifcsphigho2_02_scaffold_2163_27
unknown

Not on your lists

comp(28098..28400)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

Displaying 27 items

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