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rifcsphigho2_02_scaffold_2297

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_2297_1
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1..2574)
-----------------
DNA (2574bp)
protein (858aa)
LamG-like jellyroll fold n=1 Tax=Beggiatoa sp. PS RepID=A7BUY9_9GAMM
rifcsphigho2_02_scaffold_2297_2
unknown

Not on your lists

comp(2718..3536)
-----------------
DNA (819bp)
protein (273aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2297_3

Not on your lists

comp(3523..4035)
-----------------
DNA (513bp)
protein (171aa)
PE-PGRS family protein
id=5047280 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2297_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

4436..4702
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364AD11
hypothetical protein
rifcsphigho2_02_scaffold_2297_5

Not on your lists

4699..5040
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TE55_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_2297_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5052..5498
-----------------
DNA (447bp)
protein (149aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON id=5103729 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_2297_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(5479..5871)
-----------------
DNA (393bp)
protein (131aa)
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_2297_8

Not on your lists

6116..6388
-----------------
DNA (273bp)
protein (91aa)
UPF0235 protein MSWAN_0547 id=5799721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2297_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6374..7219)
-----------------
DNA (846bp)
protein (282aa)
hypothetical protein
Uncharacterized membrane protein id=5041824 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2297_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7360..8661)
-----------------
DNA (1302bp)
protein (434aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
nhaP; sodium and/or potassium/proton antiporter
rifcsphigho2_02_scaffold_2297_11
unknown

Not on your lists

comp(8756..9256)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2297_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9350..9745
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein
rifcsphigho2_02_scaffold_2297_13

Not on your lists


9747..10313
-----------------
DNA (567bp)
protein (189aa)
ASCG--DNA-directed--RNA--polymerase
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5049216 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_2297_14
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10384..10572
-----------------
DNA (189bp)
protein (63aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
DNA-directed RNA polymerase, subunit E
rifcsphigho2_02_scaffold_2297_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10584..10910
-----------------
DNA (327bp)
protein (109aa)
SSU ribosomal protein S24E id=5800442 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2297_16
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10963..11172
-----------------
DNA (210bp)
protein (70aa)
30S ribosomal protein S27ae n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLF6_9EURY
rps27AE; 30S ribosomal protein S27ae
rifcsphigho2_02_scaffold_2297_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

11275..11850
-----------------
DNA (576bp)
protein (192aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein
rifcsphigho2_02_scaffold_2297_18

Not on your lists

11983..14004
-----------------
DNA (2022bp)
protein (674aa)
Putative ATPase involved in replication control, Cdc46/Mcm family id=5800077 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA replication initiator Cdc21/Cdc54
rifcsphigho2_02_scaffold_2297_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

14012..14254
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365774B
rifcsphigho2_02_scaffold_2297_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14244..14651
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein
seg id=5041825 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2297_21
RIFOXYB2_FULL_PER_ii_54_17_curated, PER-ii, Bacteria

Not on your lists

comp(14654..15865)
-----------------
DNA (1212bp)
protein (404aa)
dCMP deaminase (EC:3.5.4.12); K01493 dCMP deaminase [EC:3.5.4.12] id=5090666 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
putative cytidine/deoxycytidylate deaminase family protein
rifcsphigho2_02_scaffold_2297_22
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

15978..16946
-----------------
DNA (969bp)
protein (323aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K1Y5U0_9BACT
rifcsphigho2_02_scaffold_2297_23
R_OP11_Woesebacteria_44_24b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16946..17413
-----------------
DNA (468bp)
protein (156aa)
Dihydrofolate reductase id=4010264 bin=PER_GWC2_41_7 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
dihydrofolate reductase
rifcsphigho2_02_scaffold_2297_24

Not on your lists

17420..18115
-----------------
DNA (696bp)
protein (232aa)
tmk; thymidylate kinase (EC:2.7.4.9)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036A9919
rifcsphigho2_02_scaffold_2297_25
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(18313..18828)
-----------------
DNA (516bp)
protein (172aa)
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2297_26
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18882..19829
-----------------
DNA (948bp)
protein (316aa)
tRNA-modifying enzyme id=5800386 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
wyosine base formation domain-containing protein
rifcsphigho2_02_scaffold_2297_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19826..20356)
-----------------
DNA (531bp)
protein (177aa)
rifcsphigho2_02_scaffold_2297_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20349..20828)
-----------------
DNA (480bp)
protein (160aa)
id=5046785 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2297_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20830..21846)
-----------------
DNA (1017bp)
protein (339aa)
transmembrane_regions id=5041857 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2297_30
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(21935..22414)
-----------------
DNA (480bp)
protein (160aa)
id=5046787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying items 1-30 of 42 in total

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