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rifcsphigho2_02_scaffold_6797

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6797_1
CG_Elusi_03, Elusimicrobia, Bacteria

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146..1972
-----------------
DNA (1827bp)
protein (609aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) Tax=CG_Elusi_03
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) id=24610201 bin=RAAC11 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RAAC11 organism_group=Unknown_CP
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
rifcsphigho2_02_scaffold_6797_2

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2084..2554
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium 405006-B04 RepID=S4W813_9BACT
Marine sediment metagenome DNA, contig: S01H1_S12361 {ECO:0000313|EMBL:GAG08480.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_6797_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2574..2984)
-----------------
DNA (411bp)
protein (137aa)
Histone acetyltransferase HPA2-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANL2_IGNAJ
Histone acetyltransferase HPA2-like protein
Histone acetyltransferase HPA2-like protein {ECO:0000313|EMBL:AFH50569.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" so
rifcsphigho2_02_scaffold_6797_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2981..3760)
-----------------
DNA (780bp)
protein (260aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=CG_Woesearch_02
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36)
rifcsphigho2_02_scaffold_6797_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4071..5144)
-----------------
DNA (1074bp)
protein (358aa)
Type 2 DNA topoisomerase 6 subunit A; K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=CG_Woesearch_01
type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048467 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3)
rifcsphigho2_02_scaffold_6797_6

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comp(5137..6804)
-----------------
DNA (1668bp)
protein (556aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_6797_7

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comp(6839..7405)
-----------------
DNA (567bp)
protein (189aa)
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain protein
rifcsphigho2_02_scaffold_6797_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7678..8391)
-----------------
DNA (714bp)
protein (238aa)
Putative Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] Tax=AR11
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] id=5048470 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1)
rifcsphigho2_02_scaffold_6797_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8363..8797)
-----------------
DNA (435bp)
protein (145aa)
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KCZ70692.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedena
Putative uncharacterized protein id=4924042 bin=PER_GWC2_41_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PilT protein domain-containing protein
rifcsphigho2_02_scaffold_6797_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8794..9069)
-----------------
DNA (276bp)
protein (92aa)
Transcriptional regulator, AbrB family Tax=AR11
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_6797_11

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comp(9133..9858)
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
Uncharacterized protein {ECO:0000313|EMBL:KHO47847.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_6797_12

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9968..11629
-----------------
DNA (1662bp)
protein (554aa)
asparagine synthase, asparagine synthase glutamine-hydrolysing (EC:6.3.5.4)
asnB-1; asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] id=5241088 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Asparagine synthase, asparagine synthase glutamine-hydrolysing {ECO:0000313|EMBL:AJF60079.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AJF60079.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.
rifcsphigho2_02_scaffold_6797_13
CG_Woesearch_01, Woesearchaeota, Archaea

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12333..13568
-----------------
DNA (1236bp)
protein (412aa)
DNA primase Tax=CG_Woesearch_01
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_6797_14
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

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comp(13570..14772)
-----------------
DNA (1203bp)
protein (401aa)
Ribonuclease PH (EC:2.7.7.56)
Uncharacterized protein {ECO:0000313|EMBL:KKQ76423.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
hypothetical protein id=1857552 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
rifcsphigho2_02_scaffold_6797_15

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comp(14788..15867)
-----------------
DNA (1080bp)
protein (360aa)
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KHO50500.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=4071627 bin=GWF2_CPR3_35_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_CPR3_35_18 organism_group=CPR3
surA; chaperone surA
rifcsphigho2_02_scaffold_6797_16
CG_Woesearch_03, Woesearchaeota, Archaea

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16034..17359
-----------------
DNA (1326bp)
protein (442aa)
hypothetical protein; K06915 Tax=CG_Woesearch_03
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_6797_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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17395..17697
-----------------
DNA (303bp)
protein (101aa)
seg Tax=RBG_13_Woesearchaeota_36_6_curated
seg id=5799943 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6797_18
unknown

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17858..18022
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6797_19
unknown

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comp(18281..18820)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6797_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(18866..19690)
-----------------
DNA (825bp)
protein (275aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RBG_13_Woesearchaeota_36_6_curated
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003806464
Displaying 20 items

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