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rifcsphigho2_02_scaffold_4374

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4374_1

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comp(302..1249)
-----------------
DNA (948bp)
protein (316aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27E7 RepID=Q64B93_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83334.1}; TaxID=285383 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos27E7.;"
rifcsphigho2_02_scaffold_4374_2
unknown

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1367..1714
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4374_3
unknown

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comp(1715..2452)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=3 Tax=Solanum RepID=K4BVL0_SOLLC id=5103459 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=3 Tax=Solanum RepID=K4BVL0_SOLLC Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_4374_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2637..3707)
-----------------
DNA (1071bp)
protein (357aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_01
cell division protein FtsZ; K03531 cell division protein FtsZ id=5044675 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cell division protein FtsZ
rifcsphigho2_02_scaffold_4374_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4020..4652)
-----------------
DNA (633bp)
protein (211aa)
nitroreductase Tax=CG_Woesearch_02
nitroreductase id=5044666 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nitroreductase
rifcsphigho2_02_scaffold_4374_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4722..6476
-----------------
DNA (1755bp)
protein (585aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376C7D7 rbh
ATP-dependent DNA ligase
rifcsphigho2_02_scaffold_4374_7
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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6545..6763
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72914.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
hypothetical protein
rifcsphigho2_02_scaffold_4374_8

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6763..7017
-----------------
DNA (255bp)
protein (85aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LVN9_9EURY
RelE protein {ECO:0000313|EMBL:KHO51702.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RelE protein
rifcsphigho2_02_scaffold_4374_trna_2
unknown

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comp(7027..7098)
-----------------
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_4374_9
Sulfurimonas denitrificans, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7214..8200
-----------------
DNA (987bp)
protein (329aa)
Metal dependent phosphohydrolase n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30S67_SULDN
HD-GYP domain-containing protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABB44164.1}; TaxID=326298 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sul
rifcsphigho2_02_scaffold_4374_10
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(8205..9413)
-----------------
DNA (1209bp)
protein (403aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQY9_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_4374_11
unknown

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9593..10975
-----------------
DNA (1383bp)
protein (461aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4374_12
unknown

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10997..11689
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4374_13
RLO_RIF03_38_15, RIF3, Bacteria

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comp(11724..12203)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
hypothetical protein id=14426317 bin=bin1_lowGC species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
rifcsphigho2_02_scaffold_4374_14

Not on your lists

comp(12318..13871)
-----------------
DNA (1554bp)
protein (518aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DEAD/DEAH box helicase domain protein
rifcsphigho2_02_scaffold_4374_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(13907..15802)
-----------------
DNA (1896bp)
protein (632aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
subtilisin-like serine protease Tax=CG_Woesearch_02
Ig family protein
rifcsphigho2_02_scaffold_4374_16
Parcubacteria bacterium GW2011_GWA2_46_7, Parcubacteria, Bacteria

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comp(15840..16877)
-----------------
DNA (1038bp)
protein (346aa)
Ig family protein {ECO:0000313|EMBL:KKU43483.1}; TaxID=1618837 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_7.;"
Pyrrolo-quinoline quinone id=5800544 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_4374_trna_1
unknown

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comp(17124..17212)
-----------------
DNA (89bp)
transferRNA
rifcsphigho2_02_scaffold_4374_17

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17319..17603
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_4374_18
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17605..18147
-----------------
DNA (543bp)
protein (181aa)
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomo
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Selenomonas sp. CM52 RepID=J6HRQ8_9FIRM
rifcsphigho2_02_scaffold_4374_19
unknown

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18149..18433
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4374_20

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18439..19845
-----------------
DNA (1407bp)
protein (469aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO50649.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO50649.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_4374_21
AR4, Woesearchaeaota, DPANN, Archaea

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19842..20000
-----------------
DNA (159bp)
protein (53aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=AR4
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Displaying 23 items

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