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rifcsphigho2_02_scaffold_5884

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5884_1
unknown

Not on your lists

comp(224..1024)
-----------------
DNA (801bp)
protein (267aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5884_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1021..1701)
-----------------
DNA (681bp)
protein (227aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_13_Woesearchaeota_36_6_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=5097762 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
prolipoprotein diacylglyceryl transferase
rifcsphigho2_02_scaffold_5884_3
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(1817..2998)
-----------------
DNA (1182bp)
protein (394aa)
redox-active membrane protein Tax=RBG_13_Nitrospirae_39_12_curated
Redox-active membrane protein id=3426836 bin=GWB1_CP_36_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
redox-active membrane protein
rifcsphigho2_02_scaffold_5884_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3020..3988)
-----------------
DNA (969bp)
protein (323aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_5884_5
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4228..5946
-----------------
DNA (1719bp)
protein (573aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar monterrey BGSC 4AJ1 RepID=C3FC35_BACTU
Uncharacterized protein {ECO:0000313|EMBL:EEM56292.1}; TaxID=527022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis s
rifcsphigho2_02_scaffold_5884_6
CG_PER_02, Peregrinibacteria, Bacteria

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comp(5985..6329)
-----------------
DNA (345bp)
protein (115aa)
thioredoxin Tax=CG_PER_02
VKORC1/thioredoxin domain protein id=4242293 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Vitamin K epoxide reductase
rifcsphigho2_02_scaffold_5884_7
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6360..8726)
-----------------
DNA (2367bp)
protein (789aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:AFD00370.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AFD00370.1};; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7X0_METCZ
rifcsphigho2_02_scaffold_5884_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(8738..9238)
-----------------
DNA (501bp)
protein (167aa)
putative protein phosphatase (EC:3.1.3.-) Tax=CG_Pacearch_06
putative protein phosphatase (EC:3.1.3.-)
dual specificity protein phosphatase id=133447 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsphigho2_02_scaffold_5884_9
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

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comp(9198..9473)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C2C4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR15041.1}; TaxID=1618454 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_32.;"
rifcsphigho2_02_scaffold_5884_10
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

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comp(9641..9880)
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C4250
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
rifcsphigho2_02_scaffold_5884_11
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(9877..10359)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003819A6A
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein
rifcsphigho2_02_scaffold_5884_12
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10356..11024)
-----------------
DNA (669bp)
protein (223aa)
Isoprenylcysteine carboxyl methyltransferase id=4734476 bin=GWC2_Deltaproteobacteria_55_46 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
isoprenylcysteine carboxyl methyltransferase Tax=GWC2_Deltaproteobacteria_55_46b_curated
Isoprenylcysteine carboxyl methyltransferase
rifcsphigho2_02_scaffold_5884_13

Not on your lists

comp(11021..11359)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM85503.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YHS domain-containing protein id=12498618 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rifcsphigho2_02_scaffold_5884_14
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(11376..11996)
-----------------
DNA (621bp)
protein (207aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
rifcsphigho2_02_scaffold_5884_15

Not on your lists

comp(12023..12253)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C4250
Uncharacterized protein {ECO:0000313|EMBL:KHO49658.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsphigho2_02_scaffold_5884_16

Not on your lists

comp(12265..13284)
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN93521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FAD dependent oxidoreductase id=24457421 bin=RBG_19FT_COMBO_GAL15_69_19 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
monooxygenase FAD-binding protein
rifcsphigho2_02_scaffold_5884_17

Not on your lists

comp(13300..13980)
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKN93524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein id=5241605 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5884_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14003..14245)
-----------------
DNA (243bp)
protein (81aa)
Thioredoxin n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VSW7_9EURY
Glutaredoxin-like protein {ECO:0000313|EMBL:KCZ73030.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;
redox-active disulfide protein 1
rifcsphigho2_02_scaffold_5884_19

Not on your lists

comp(14242..15291)
-----------------
DNA (1050bp)
protein (350aa)
Putative cytochrome C biogenesis protein transmembrane region n=2 Tax=environmental samples RepID=B3TBF8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN93517.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome c biogenesis protein transmembrane region
rifcsphigho2_02_scaffold_5884_20

Not on your lists

comp(15327..15575)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02691.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=5800399 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_5884_21
unknown

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comp(15577..15813)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5884_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15829..16002)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FABAB
Tax=AR9
rifcsphigho2_02_scaffold_5884_23
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(16042..16203)
-----------------
DNA (162bp)
protein (54aa)
Marine sediment metagenome DNA, contig: S12H4_S06430 Tax=Altiarchaeum hamiconexum
rifcsphigho2_02_scaffold_5884_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(16205..17041)
-----------------
DNA (837bp)
protein (279aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_13_Woesearchaeota_36_6_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=5093136 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
prolipoprotein diacylglyceryl transferase
Displaying 24 items

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