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rifcsphigho2_02_scaffold_8430

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8430_1
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(64..708)
-----------------
DNA (645bp)
protein (215aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RBG_13_Chloroflexi_48_17_curated
riboflavin biosynthesis GTP cyclohydrolase II RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHZ1_THEYD
rifcsphigho2_02_scaffold_8430_2
AR11, Woesearchaeaota, DPANN, Archaea

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comp(875..1948)
-----------------
DNA (1074bp)
protein (358aa)
riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] Tax=AR11
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR00_ACEAZ
rifcsphigho2_02_scaffold_8430_3

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comp(2014..3189)
-----------------
DNA (1176bp)
protein (392aa)
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Clostridium sp. ASF356 RepID=N1Z9X6_9CLOT
Marine sediment metagenome DNA, contig: S01H1_L00126 {ECO:0000313|EMBL:GAF78761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
mannitol-1-phosphate 5-dehydrogenase
rifcsphigho2_02_scaffold_8430_4

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comp(3210..4463)
-----------------
DNA (1254bp)
protein (418aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00037746BE
Uncharacterized protein {ECO:0000313|EMBL:KKL19832.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
rifcsphigho2_02_scaffold_8430_5

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comp(4465..5901)
-----------------
DNA (1437bp)
protein (479aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4A13F rbh
Marine sediment metagenome DNA, contig: S01H1_S18432 {ECO:0000313|EMBL:GAG23332.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsphigho2_02_scaffold_8430_6
unknown

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comp(5864..5971)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8430_7
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6004..7407)
-----------------
DNA (1404bp)
protein (468aa)
L-sorbose 1-phosphate reductase id=4207187 bin=GWF2_Planctomycete_41_51 species=unknown genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
GroES-like protein Tax=GWF2_Planctomycetes_41_51_curated
rifcsphigho2_02_scaffold_8430_8
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7429..8754)
-----------------
DNA (1326bp)
protein (442aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:514 RepID=R5BLJ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCX52351.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
rifcsphigho2_02_scaffold_8430_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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8908..11298
-----------------
DNA (2391bp)
protein (797aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_13_Chloroflexi_68_17_curated
jan:Jann_3081 dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] id=1246850 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
rifcsphigho2_02_scaffold_8430_10
unknown

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11327..12616
-----------------
DNA (1290bp)
protein (430aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8430_11
bacterium UASB270, Bacteria

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comp(12670..13893)
-----------------
DNA (1224bp)
protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A23721
argininosuccinate synthase
rifcsphigho2_02_scaffold_8430_12
CG_Pacearch_05, Pacearchaeota, Archaea

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14040..14273
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376230B
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_02_scaffold_8430_13
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

14278..14532
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370C82F
RelE protein; K06218 RelE protein Tax=CG_Pacearch_05
RelE protein
rifcsphigho2_02_scaffold_8430_14
unknown

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comp(14686..14844)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8430_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14845..15876)
-----------------
DNA (1032bp)
protein (344aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semiald
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWN8_METFV
rifcsphigho2_02_scaffold_8430_16
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(15842..16996)
-----------------
DNA (1155bp)
protein (385aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_RIF03_38_10_curated
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6G6_METSW
rifcsphigho2_02_scaffold_8430_17
CG_Micra_01, Micraarchaeota, Archaea

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comp(17128..17475)
-----------------
DNA (348bp)
protein (116aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=CG_Micra_01
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=3880730 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Displaying 17 items

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