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rifcsphigho2_02_scaffold_9557

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9557_1
unknown

Not on your lists

comp(55..642)
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(626..1435)
-----------------
DNA (810bp)
protein (270aa)
hypothetical protein Tax=CG_Woesearch_02
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_9557_3
unknown

Not on your lists

comp(1465..1623)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_4

Not on your lists

1753..2064
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein
id=5046321 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46122.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_9557_5
unknown

Not on your lists

2064..2597
-----------------
DNA (534bp)
protein (178aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2694..3107
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G136_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN56326.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
Protein export cytoplasm protein SecA ATPase RNA helicase
rifcsphigho2_02_scaffold_9557_7
unknown

Not on your lists

comp(3104..4246)
-----------------
DNA (1143bp)
protein (381aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_8
unknown

Not on your lists

comp(4236..4364)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(4366..4797)
-----------------
DNA (432bp)
protein (144aa)
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Woesearchaeota_36_6_curated
AsnC family transcriptional regulator id=5045866 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AsnC family transcriptional regulator
rifcsphigho2_02_scaffold_9557_10
unknown

Not on your lists

comp(5067..5198)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_11
unknown

Not on your lists

comp(5268..6782)
-----------------
DNA (1515bp)
protein (505aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

6899..7171
-----------------
DNA (273bp)
protein (91aa)
transmembrane_regions id=5799577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transmembrane_regions Tax=AR15
rifcsphigho2_02_scaffold_9557_13
unknown

Not on your lists

comp(7176..7409)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9557_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(7403..7885)
-----------------
DNA (483bp)
protein (161aa)
seg Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_9557_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(7882..8163)
-----------------
DNA (282bp)
protein (94aa)
Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_9557_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

8278..9027
-----------------
DNA (750bp)
protein (250aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_9557_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9024..9554
-----------------
DNA (531bp)
protein (177aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_9557_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9551..10426)
-----------------
DNA (876bp)
protein (292aa)
type IV leader peptidase family protein Tax=CG_Woesearch_02
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsphigho2_02_scaffold_9557_19

Not on your lists

10496..11224
-----------------
DNA (729bp)
protein (243aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:AIF00786.1}; EC=2.5.1.89 {ECO:0000313|EMBL:AIF00786.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="unculture
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
rifcsphigho2_02_scaffold_9557_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


11349..11708
-----------------
DNA (360bp)
protein (120aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Woesearch_02
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl7ae; 50S ribosomal protein L7Ae
rifcsphigho2_02_scaffold_9557_21

Not on your lists


11711..12058
-----------------
DNA (348bp)
protein (116aa)
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e
rifcsphigho2_02_scaffold_9557_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12058..12246
-----------------
DNA (189bp)
protein (63aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373F97F
50S ribosomal protein L24e Tax=AR11
50S ribosomal protein L24e
rifcsphigho2_02_scaffold_9557_23
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

12249..12812
-----------------
DNA (564bp)
protein (188aa)
nucleoside diphosphate kinase ; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000375701A
nucleoside diphosphate kinase
rifcsphigho2_02_scaffold_9557_24

Not on your lists

12825..15005
-----------------
DNA (2181bp)
protein (727aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5043960 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 2
rifcsphigho2_02_scaffold_9557_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

15116..16399
-----------------
DNA (1284bp)
protein (428aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043959 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha Tax=AR4
Elongation factor 1-alpha
rifcsphigho2_02_scaffold_9557_26
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


16484..16792
-----------------
DNA (309bp)
protein (103aa)
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=CG_Woesearch_03
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10P
rifcsphigho2_02_scaffold_9557_27
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16923..19688)
-----------------
DNA (2766bp)
protein (922aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369FE5C
hypothetical protein
Tax=AR9
rifcsphigho2_02_scaffold_9557_trna_3
unknown

Not on your lists

comp(19745..19827)
-----------------
DNA (83bp)
transferRNA
rifcsphigho2_02_scaffold_9557_trna_2
unknown

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comp(20157..20293)
-----------------
DNA (137bp)
transferRNA
rifcsphigho2_02_scaffold_9557_28
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(20320..20730)
-----------------
DNA (411bp)
protein (137aa)
Hit-like protein involved in cell-cycle regulation
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5240730 bin=GW2011_AR10_complete species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
Displaying items 1-30 of 36 in total

View Taxonomy