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rifcsphigho2_02_scaffold_2510

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2510_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2..190)
-----------------
DNA (189bp)
protein (63aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_2510_2
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(169..954)
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein
RNA-directed DNA polymerase Tax=GWA1_OD1_36_12
id=5103469 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_2510_3
unknown

Not on your lists

1141..1743
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2510_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1728..2918)
-----------------
DNA (1191bp)
protein (397aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain id=5049183 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
rifcsphigho2_02_scaffold_2510_5

Not on your lists

comp(2905..3771)
-----------------
DNA (867bp)
protein (289aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=5049182 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mg-chelatase subunit ChlI/Chld, magnesium chelatase subunit I {ECO:0000313|EMBL:KHO45173.1}; EC=6.6.1.1 {ECO:0000313|EMBL:KHO45173.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_2510_6
unknown

Not on your lists

comp(3830..4642)
-----------------
DNA (813bp)
protein (271aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2510_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4749..5348)
-----------------
DNA (600bp)
protein (200aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C5C91
phosphatidate cytidylyltransferase Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_2510_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5327..5911)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003720948
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
Membrane-associated phospholipid phosphatase
rifcsphigho2_02_scaffold_2510_9
unknown

Not on your lists

comp(5914..6384)
-----------------
DNA (471bp)
protein (157aa)
Putative small multi-drug export n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1X1_SPISS id=5102906 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative small multi-drug export n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1X1_SPISS Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_2510_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6381..7373)
-----------------
DNA (993bp)
protein (331aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Tax=CG_Woesearch_02
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
nucleotidyl transferase
rifcsphigho2_02_scaffold_2510_11
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(7366..8616)
-----------------
DNA (1251bp)
protein (417aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY rbh
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsphigho2_02_scaffold_2510_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8735..9958
-----------------
DNA (1224bp)
protein (408aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A Tax=CG_Woesearch_02
potassium transporter CPA
rifcsphigho2_02_scaffold_2510_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

9955..10719
-----------------
DNA (765bp)
protein (255aa)
xylose isomerase; K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=CG_Pacearch_04
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CCE42 rbh
endonuclease IV
rifcsphigho2_02_scaffold_2510_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10692..11102
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
PilT protein domain-containing protein; K07158 Tax=AR17
hypothetical protein
rifcsphigho2_02_scaffold_2510_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


11194..11757
-----------------
DNA (564bp)
protein (188aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_2510_16

Not on your lists

11809..11967
-----------------
DNA (159bp)
protein (53aa)
DNA-directed RNA polymerase subunit E RpoE2; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5049720 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, subunit E
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_2510_17
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11969..12286
-----------------
DNA (318bp)
protein (106aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rifcsphigho2_02_scaffold_2510_18
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

12566..12793
-----------------
DNA (228bp)
protein (76aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HJA0_THES4
30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (st
rifcsphigho2_02_scaffold_2510_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12797..13693)
-----------------
DNA (897bp)
protein (299aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_2510_20

Not on your lists

comp(13740..14057)
-----------------
DNA (318bp)
protein (106aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpl12p; 50S ribosomal protein L12
rifcsphigho2_02_scaffold_2510_21
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(14101..15771)
-----------------
DNA (1671bp)
protein (557aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
50S ribosomal protein L10
rifcsphigho2_02_scaffold_2510_22

Not on your lists


comp(15785..16549)
-----------------
DNA (765bp)
protein (255aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5049223 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45214.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_02_scaffold_2510_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16643..17290)
-----------------
DNA (648bp)
protein (216aa)
transglutaminase domain-containing protein Tax=CG_Woesearch_02
transglutaminase domain-containing protein id=5044916 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transglutaminase-like superfamily
rifcsphigho2_02_scaffold_2510_24
unknown

Not on your lists

17404..17991
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2510_25
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18111..20138
-----------------
DNA (2028bp)
protein (676aa)
dxs-1; 1-deoxy-D-xylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J3G0_DESRM
deoxyxylulose-5-phosphate synthase
rifcsphigho2_02_scaffold_2510_26
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20135..21181
-----------------
DNA (1047bp)
protein (349aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Thermoanaerobacter RepID=B0K1E3_THEPX
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=GWA2_OD1_40_9
rifcsphigho2_02_scaffold_2510_27
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21168..22307
-----------------
DNA (1140bp)
protein (380aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRH0_ACEAZ
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=GWA2_OD1_40_9
rifcsphigho2_02_scaffold_2510_28
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22304..23464
-----------------
DNA (1161bp)
protein (387aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=5090670 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKR78760.1}; Flags: Fragment;; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacte
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
rifcsphigho2_02_scaffold_2510_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23466..24323
-----------------
DNA (858bp)
protein (286aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSQ6_9CLOT
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
rifcsphigho2_02_scaffold_2510_30
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists


24313..25131
-----------------
DNA (819bp)
protein (273aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=GWA2_RIF01_43_8_curated
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=5048457 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
Displaying items 1-30 of 36 in total

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