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rifcsphigho2_02_scaffold_6159

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6159_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..1037
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037397BF
Orn/DAP/Arg decarboxylase 2 Tax=CG_Woesearch_02
Orn/DAP/Arg decarboxylase 2
rifcsphigho2_02_scaffold_6159_2
AR9, Woesearchaeaota, DPANN, Archaea

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1047..1892
-----------------
DNA (846bp)
protein (282aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=AR9
agmatinase id=14425505 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
speB; agmatinase
rifcsphigho2_02_scaffold_6159_3
unknown

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comp(1979..2590)
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6159_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2717..3130
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_6159_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3257..6895
-----------------
DNA (3639bp)
protein (1213aa)
AAA family ATPase, CDC48 subfamily id=4201021 bin=PER_GWC2_41_7 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AAA family ATPase, CDC48 subfamily Tax=AR15
ATPase AAA
rifcsphigho2_02_scaffold_6159_6
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(6949..7338)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN domain-containing protein Tax=CG_Pacearch_05
PIN protein
rifcsphigho2_02_scaffold_6159_7
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7313..7531)
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMF4_NITGG
Uncharacterized protein Tax=AR13
rifcsphigho2_02_scaffold_6159_8

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7623..7886
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51331.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_6159_9

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7852..8232
-----------------
DNA (381bp)
protein (127aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C5C3_9CREN
nucleic acid-binding protein
rifcsphigho2_02_scaffold_6159_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8270..9568
-----------------
DNA (1299bp)
protein (433aa)
glutamyl-tRNA(Gln) amidotransferase, subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Woesearch_02
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_02_scaffold_6159_11
unknown

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9570..9803
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6159_12
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

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comp(9805..11013)
-----------------
DNA (1209bp)
protein (403aa)
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2FF78_9BACT
rifcsphigho2_02_scaffold_6159_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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11050..12522
-----------------
DNA (1473bp)
protein (491aa)
glutamyl-tRNA(gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=RBG_13_Woesearchaeota_36_6_curated
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_02_scaffold_6159_14
unknown

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comp(12533..13174)
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6159_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(13161..14216)
-----------------
DNA (1056bp)
protein (352aa)
Glycosyl transferase family 2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY86_METFV
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP77268.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanother
rifcsphigho2_02_scaffold_6159_16
GWC2_OP11_ACD12_35_12, Roizmanbacteria, Microgenomates, Bacteria

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comp(14213..14872)
-----------------
DNA (660bp)
protein (220aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2DA97_9BACT
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:KKP65564.1}; TaxID=1618485 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_35_12.;"
rifcsphigho2_02_scaffold_6159_17

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comp(14865..15650)
-----------------
DNA (786bp)
protein (262aa)
alpha/beta hydrolase id=5042280 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Alpha/beta hydrolase {ECO:0000313|EMBL:KHO46778.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_6159_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15658..16623)
-----------------
DNA (966bp)
protein (322aa)
hypothetical protein
id=5041678 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Displaying 18 items

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