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rifcsphigho2_02_scaffold_4770

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4770_1
unknown

Not on your lists

3..272
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_2
unknown

Not on your lists

comp(709..942)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1283..2776
-----------------
DNA (1494bp)
protein (498aa)
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein id=5043681 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_4770_4

Not on your lists

2778..3335
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein id=5043682 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46658.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_4770_5
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

3332..3901
-----------------
DNA (570bp)
protein (190aa)
id=5045280 Tax=CG_Pacearch_04
id=5045280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_4770_6
unknown

Not on your lists

3967..4329
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_7
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(4289..5377)
-----------------
DNA (1089bp)
protein (363aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KIY13069.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KIY13069.1};; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocla
aat-5; aspartate aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Fischerella muscicola RepID=UPI0002E600B1
rifcsphigho2_02_scaffold_4770_8
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(5414..5770)
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein Tax=CG_CPR10_02
hypothetical protein id=120543 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsphigho2_02_scaffold_4770_9

Not on your lists

comp(5774..5998)
-----------------
DNA (225bp)
protein (75aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26B2 RepID=Q64C65_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83012.1}; TaxID=285406 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26B2.;"
hypothetical protein
rifcsphigho2_02_scaffold_4770_10
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(6059..6721)
-----------------
DNA (663bp)
protein (221aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis 8.8.11 RepID=M1XRD6_9EURY id=5102960 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ArsR family transcription regulator
ArsR family transcription regulator Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_4770_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6718..7332)
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein
id=5102959 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5102959 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_4770_12
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7520..8707
-----------------
DNA (1188bp)
protein (396aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0LYC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72892.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="F
ATPase (AAA+ superfamily)
rifcsphigho2_02_scaffold_4770_13
unknown

Not on your lists

comp(9234..10268)
-----------------
DNA (1035bp)
protein (345aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

10340..10753
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein id=5800089 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_4770_15
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

10768..12174
-----------------
DNA (1407bp)
protein (469aa)
FeS assembly protein SufB Tax=GWA1_Berkelbacteria_36_10
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsphigho2_02_scaffold_4770_16

Not on your lists

12213..13388
-----------------
DNA (1176bp)
protein (392aa)
sufD; protein SufD; K09015 Fe-S cluster assembly protein SufD id=5048370 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:KHO45042.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
sufD; protein SufD
rifcsphigho2_02_scaffold_4770_17

Not on your lists

13459..14712
-----------------
DNA (1254bp)
protein (418aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037CFF17
cysteine desulfurase SufS
rifcsphigho2_02_scaffold_4770_18

Not on your lists

14709..15188
-----------------
DNA (480bp)
protein (160aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL36_THEM7
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:KHO52917.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
NifU family SUF system FeS assembly protein
rifcsphigho2_02_scaffold_4770_19
GWA2_PER_47_7, Peregrinibacteria, Bacteria

Not on your lists

15172..15924
-----------------
DNA (753bp)
protein (251aa)
Iron-sulfur cluster assembly ATPase protein SufC n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E3G1_9FIRM
FeS assembly ATPase SufC Tax=GWA2_PER_47_7
FeS assembly ATPase SufC
rifcsphigho2_02_scaffold_4770_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15921..16427
-----------------
DNA (507bp)
protein (169aa)
erpA; iron-sulfur cluster insertion protein erpA id=18248539 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
erpA; iron-sulfur cluster insertion protein erpA Tax=AR5
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_02_scaffold_4770_21
unknown

Not on your lists

comp(16424..16894)
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17002..18123)
-----------------
DNA (1122bp)
protein (374aa)
Iron-only hydrogenase maturation protein HydG n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2U2_CLOCD
iron-only hydrogenase maturation protein HydG
Iron-only hydrogenase maturation protein HydG {ECO:0000313|EMBL:AEV68206.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostr
rifcsphigho2_02_scaffold_4770_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

18223..18960
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_4770_24
unknown

Not on your lists

comp(19109..19255)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4770_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

19361..19903
-----------------
DNA (543bp)
protein (181aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=CG_Aenigma_01
Cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CR6_METBF
rifcsphigho2_02_scaffold_4770_26
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

20159..22123
-----------------
DNA (1965bp)
protein (655aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curate
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
Ribonucleoside-diphosphate reductase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IW97_9FIRM
rifcsphigho2_02_scaffold_4770_27
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

22086..22343
-----------------
DNA (258bp)
protein (86aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=CG_Pacearch_05
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360BC5F
Displaying 27 items

View Taxonomy