ggKbase home page

rifcsphigho2_02_scaffold_5030

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5030_1
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

1..1212
-----------------
DNA (1212bp)
protein (404aa)
hypothetical protein id=5049533 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5030_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1212..3632
-----------------
DNA (2421bp)
protein (807aa)
mg-chelatase subunit chld Tax=CG_Woesearch_02
hypothetical protein id=5049534 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_5030_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

3755..4270
-----------------
DNA (516bp)
protein (172aa)
id=5049535 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
smc; chromosome partition protein
Tax=AR18
rifcsphigho2_02_scaffold_5030_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4289..5080
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein id=5049536 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5030_5

Not on your lists

5255..6190
-----------------
DNA (936bp)
protein (312aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] id=5045837 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
MoxR-like protein ATPase {ECO:0000313|EMBL:KHO46450.1}; EC=3.6.3.- {ECO:0000313|EMBL:KHO46450.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATPase AAA
rifcsphigho2_02_scaffold_5030_6

Not on your lists

6218..7084
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein id=5049539 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53875.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_02_scaffold_5030_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

7308..8324
-----------------
DNA (1017bp)
protein (339aa)
Radical SAM domain-containing protein Tax=AR9
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_5030_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8326..8580)
-----------------
DNA (255bp)
protein (85aa)
Putative uncharacterized protein id=5046867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative uncharacterized protein Tax=AR18
rifcsphigho2_02_scaffold_5030_9

Not on your lists

comp(8577..8873)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=3 Tax=Leptospira RepID=K8KXF3_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KHO54779.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsphigho2_02_scaffold_5030_10
unknown

Not on your lists

comp(8964..9425)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5030_11

Not on your lists

comp(9433..9750)
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW31_METHD
Marine sediment metagenome DNA, contig: S06H3_S02992 {ECO:0000313|EMBL:GAI24258.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_02_scaffold_5030_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9710..10006)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K09728 hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5030_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

10097..10678
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FEE17
hypothetical protein
Flap endonuclease-1 Tax=AR6
rifcsphigho2_02_scaffold_5030_14

Not on your lists

comp(10703..11569)
-----------------
DNA (867bp)
protein (289aa)
UbiA prenyltransferase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R530_METFO
Prenyltransferase UbiA {ECO:0000313|EMBL:KHO51712.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Conserved membrane protein, possible 4-hydroxybenzoate octaprenyltransferase
rifcsphigho2_02_scaffold_5030_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

11654..11797
-----------------
DNA (144bp)
protein (48aa)
Tax=CG_Pacearch_04
rifcsphigho2_02_scaffold_5030_16
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

12149..12622
-----------------
DNA (474bp)
protein (158aa)
seg id=5041900 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
rifcsphigho2_02_scaffold_5030_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12612..13883)
-----------------
DNA (1272bp)
protein (424aa)
MiaB-like tRNA modifying enzyme id=5800532 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
MiaB-like tRNA modifying enzyme Tax=AR15
MiaB-like tRNA modifying enzyme
rifcsphigho2_02_scaffold_5030_18

Not on your lists

14315..14635
-----------------
DNA (321bp)
protein (107aa)
V-type H+-transporting ATPase subunit E {ECO:0000313|EMBL:KHO51106.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO51106.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
A-type ATP synthase subunit H id=5800547 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
atpH; A-type ATP synthase subunit H
rifcsphigho2_02_scaffold_5030_19

Not on your lists

14632..16575
-----------------
DNA (1944bp)
protein (648aa)
atpI; V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
V-type ATPase 116 kDa subunit id=5800548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5030_20

Not on your lists

16579..16806
-----------------
DNA (228bp)
protein (76aa)
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:KHO51104.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO51104.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
V-type ATP synthase subunit K (EC:3.6.3.14)
H(+)-transporting ATP synthase, subunit K id=5800549 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5030_21

Not on your lists

16828..17382
-----------------
DNA (555bp)
protein (185aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=5044031 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Archaeal/vacuolar-type H+-ATPase subunit E
rifcsphigho2_02_scaffold_5030_22

Not on your lists

17375..18430
-----------------
DNA (1056bp)
protein (352aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ATP synthase A1, C subunit
rifcsphigho2_02_scaffold_5030_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

18430..18726
-----------------
DNA (297bp)
protein (99aa)
V-type ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] Tax=RBG_16_Euryarchaeota_68_13_curated
rifcsphigho2_02_scaffold_5030_24

Not on your lists

18732..20489
-----------------
DNA (1758bp)
protein (586aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5042341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1579365 species="Archaea.
atpA-1; A-type ATP synthase subunit A (EC:3.6.3.14)
rifcsphigho2_02_scaffold_5030_25

Not on your lists

20486..21856
-----------------
DNA (1371bp)
protein (457aa)
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] id=5042340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5030_26

Not on your lists

21858..22475
-----------------
DNA (618bp)
protein (206aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_5030_27

Not on your lists

22769..23080
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5030_28
unknown

Not on your lists

23529..23651
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5030_29
unknown

Not on your lists

23648..23803
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5030_30
unknown

Not on your lists

23824..23940
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

View Taxonomy