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rifcsphigho2_02_scaffold_5092

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5092_1
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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2..877
-----------------
DNA (876bp)
protein (292aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=GWB2_Planctomycetes_41_19_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Similar to UDP-glucose 6-dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q302_9BACT
rifcsphigho2_02_scaffold_5092_2

Not on your lists

comp(874..1734)
-----------------
DNA (861bp)
protein (287aa)
Methyltransferase type 12 n=1 Tax=uncultured bacterium RepID=K2FER4_9BACT
Methyltransferase type 12 {ECO:0000313|EMBL:EKE16389.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methyltransferase family protein
rifcsphigho2_02_scaffold_5092_3
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(1710..3515)
-----------------
DNA (1806bp)
protein (602aa)
Asparagine synthetase id=3790546 bin=GWF2_Planctomycetes_50_10 species=Alteromonas macleodii genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes rbh
asparagine synthase Tax=GWF2_Planctomycetes_50_10_curated
asparagine synthase
rifcsphigho2_02_scaffold_5092_4

Not on your lists

comp(3516..4625)
-----------------
DNA (1110bp)
protein (370aa)
Putative glycosyl transferase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL76_9PLAN id=2506 bin=ACD11 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKL67163.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polysaccharide pyruvyl transferase CsaB
rifcsphigho2_02_scaffold_5092_5
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4618..5562)
-----------------
DNA (945bp)
protein (315aa)
UDP-glucose 4-epimerase (Vi polysaccharide biosynthesis) n=1 Tax=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) RepID=Q8EPL9_OCEIH
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase (Vi polysaccharide biosynthesis) {ECO:0000313|EMBL:BAC14038.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanoba
rifcsphigho2_02_scaffold_5092_6
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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comp(5585..6760)
-----------------
DNA (1176bp)
protein (392aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:KKU48133.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
group 1 glycosyl transferase id=5096638 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Glycosyltransferase, group 1 family protein; Putative UDP-dependent alpha-galactosyltransferase, GalT
rifcsphigho2_02_scaffold_5092_7

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comp(6741..7076)
-----------------
DNA (336bp)
protein (112aa)
hypothetical protein; K09153 hypothetical protein id=5045943 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46288.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5092_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7079..7759)
-----------------
DNA (681bp)
protein (227aa)
glycosyl transferase Tax=CG_Woesearch_02
family 2 glycosyl transferase id=5045944 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein
rifcsphigho2_02_scaffold_5092_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7756..10680)
-----------------
DNA (2925bp)
protein (975aa)
Oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=CG_Woesearch_01
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=5044215 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
oligosaccharyl transferase STT3 subunit related protein
rifcsphigho2_02_scaffold_5092_10

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comp(10728..11828)
-----------------
DNA (1101bp)
protein (367aa)
geranylgeranyl reductase id=5045950 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase {ECO:0000313|EMBL:KHO46295.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Geranylgeranyl reductase
rifcsphigho2_02_scaffold_5092_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11994..13508
-----------------
DNA (1515bp)
protein (505aa)
Rhs family protein id=5043762 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Rhs family protein Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_5092_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

13632..14927
-----------------
DNA (1296bp)
protein (432aa)
hypothetical protein
seg Tax=CG_Woesearch_03
seg id=5800205 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5092_13

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14973..17606
-----------------
DNA (2634bp)
protein (878aa)
id=5045952 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46297.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5092_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

17584..18069
-----------------
DNA (486bp)
protein (162aa)
seg id=5043760 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_5092_15

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18167..19150
-----------------
DNA (984bp)
protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] id=5091421 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP32976.1}; TaxID=1618918 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_32_10.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
rifcsphigho2_02_scaffold_5092_trna_1
unknown

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comp(19184..19257)
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_5092_16
unknown

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comp(19610..21193)
-----------------
DNA (1584bp)
protein (528aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5092_17
unknown

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21309..21863
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5092_18
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21856..22716)
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein
id=5042256 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
id=5042256 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_5092_19
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

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22808..23935
-----------------
DNA (1128bp)
protein (376aa)
putative L-threonine-O-3-phosphate decarboxylase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174659C
putative L-threonine-O-3-phosphate decarboxylase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
aminotransferase
rifcsphigho2_02_scaffold_5092_20
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

23913..24593
-----------------
DNA (681bp)
protein (227aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAR3_9CLOT
HAD family hydrolase Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
phosphatase/phosphohexomutase
rifcsphigho2_02_scaffold_5092_21
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

24548..25288
-----------------
DNA (741bp)
protein (247aa)
Nodulation protein S NodS n=1 Tax=Leptospira sp. B5-022 RepID=M6DEI3_9LEPT
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
rifcsphigho2_02_scaffold_5092_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

25656..26585
-----------------
DNA (930bp)
protein (310aa)
hypothetical protein id=5050685 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5092_23

Not on your lists

comp(26628..28022)
-----------------
DNA (1395bp)
protein (465aa)
Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|RuleBase:RU000548};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Adenosylhomocysteinase n=1 Tax=uncultured bacterium RepID=K2FXG8_9BACT
ahcY; adenosylhomocysteinase
rifcsphigho2_02_scaffold_5092_24
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

28240..28659
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI0003714E8F
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=GWA2_WOR_2_47_8_curated
transcriptional regulator
rifcsphigho2_02_scaffold_5092_25
unknown

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28656..29231
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5092_26
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(29232..30218)
-----------------
DNA (987bp)
protein (329aa)
cpb:Cphamn1_1641 S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=2403 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
pfkb domain protein Tax=CG_Pacearch_04
rbsK; Sugar kinase, ribokinase family
rifcsphigho2_02_scaffold_5092_27
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30242..31222)
-----------------
DNA (981bp)
protein (327aa)
Phospholipase D/Transphosphatidylase id=5799976 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phospholipase D/Transphosphatidylase Tax=AR15
phospholipase D/transphosphatidylase
rifcsphigho2_02_scaffold_5092_28
unknown

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comp(31277..31831)
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5092_29
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(32109..33929)
-----------------
DNA (1821bp)
protein (607aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_02
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying items 1-30 of 32 in total

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