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rifcsphigho2_02_scaffold_5869

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5869_1

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comp(3..602)
-----------------
DNA (600bp)
protein (200aa)
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO49347.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
transcriptional regulator TrmB id=5044016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_5869_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(620..1879)
-----------------
DNA (1260bp)
protein (420aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHD2_METFS
putative ATPase (AAA+ superfamily) Tax=CG_Woesearch_01
putative ATPase (AAA+ superfamily)
rifcsphigho2_02_scaffold_5869_3
unknown

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2025..2930
-----------------
DNA (906bp)
protein (302aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5869_4
RLO_OD1_Moranbacteria_48_12, Moranbacteria, Parcubacteria, Bacteria

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2914..4335
-----------------
DNA (1422bp)
protein (474aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Moranbacteria_48_12_curated
pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5044018 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
phosphoenolpyruvate synthase (EC:2.7.9.2)
rifcsphigho2_02_scaffold_5869_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4336..6600)
-----------------
DNA (2265bp)
protein (755aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=CG_Woesearch_02
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] id=5048888 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase 1
rifcsphigho2_02_scaffold_5869_6

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6834..8510
-----------------
DNA (1677bp)
protein (559aa)
ABC-1 protein {ECO:0000313|EMBL:KHO53628.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ABC transporter
ABC transporter; K03688 ubiquinone biosynthesis protein id=5047443 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5869_7
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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8507..8998
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
hypothetical protein id=1241810 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rifcsphigho2_02_scaffold_5869_8
unknown

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9080..9412
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5869_9

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9416..10219
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein
Uncharacterized membrane protein id=5042271 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46769.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5869_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10546..11514
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72706.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus
hypothetical protein
rifcsphigho2_02_scaffold_5869_11

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11684..14284
-----------------
DNA (2601bp)
protein (867aa)
seg id=5800732 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62062.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
glycoside hydrolase family 18
rifcsphigho2_02_scaffold_5869_12
unknown

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14486..15412
-----------------
DNA (927bp)
protein (309aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5869_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15506..16537
-----------------
DNA (1032bp)
protein (344aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=5049182 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
rifcsphigho2_02_scaffold_5869_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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16509..17063
-----------------
DNA (555bp)
protein (185aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain id=5049183 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying 14 items

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