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rifcsphigho2_02_scaffold_3884

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3884_1
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(2..397)
-----------------
DNA (396bp)
protein (132aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein Tax=CG_Woesearch_03
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ZPR1-like protein zinc finger protein
rifcsphigho2_02_scaffold_3884_2

Not on your lists

comp(578..994)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein; K09152 hypothetical protein id=5049200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45191.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_3884_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


1355..1639
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
LSU ribosomal protein L21E Tax=AR15
50S ribosomal protein L21e
rifcsphigho2_02_scaffold_3884_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1648..1995
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3884_5

Not on your lists

1955..2644
-----------------
DNA (690bp)
protein (230aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO51092.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA-binding protein
rifcsphigho2_02_scaffold_3884_6
unknown

Not on your lists

2976..3824
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_7

Not on your lists

comp(3807..4628)
-----------------
DNA (822bp)
protein (274aa)
23S rRNA (Adenine2503-C2)-methyltransferase {ECO:0000313|EMBL:KHO51276.1}; EC=2.1.1.192 {ECO:0000313|EMBL:KHO51276.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3B4_DESTD
ribosomal RNA large subunit methyltransferase N
rifcsphigho2_02_scaffold_3884_8

Not on your lists

comp(5496..8855)
-----------------
DNA (3360bp)
protein (1120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL97947.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
seg id=5800568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3884_9
unknown

Not on your lists

8958..9374
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9582..9884)
-----------------
DNA (303bp)
protein (101aa)
DNA polymerase beta domain-containing protein region; K07075 id=5045987 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein region; K07075 Tax=AR4
DNA polymerase beta domain protein region
rifcsphigho2_02_scaffold_3884_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(9971..11287)
-----------------
DNA (1317bp)
protein (439aa)
translation initiation factor IF-2; K03242 translation initiation factor 2 subunit 3 Tax=CG_Woesearch_02
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation initiation factor 2 subunit gamma
rifcsphigho2_02_scaffold_3884_12
unknown

Not on your lists

11576..12022
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12025..12486)
-----------------
DNA (462bp)
protein (154aa)
Phosphoesterase PA-phosphatase related protein id=4383675 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
phosphoesterase PA-phosphatase-like protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
membrane-associated phospholipid phosphatase
rifcsphigho2_02_scaffold_3884_14
unknown

Not on your lists

comp(12531..13529)
-----------------
DNA (999bp)
protein (333aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_15

Not on your lists

comp(13593..14912)
-----------------
DNA (1320bp)
protein (440aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] id=5048690 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Phosphomannomutase {ECO:0000313|EMBL:KHO45353.1}; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45353.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
phosphomannomutase (EC:5.4.2.8)
rifcsphigho2_02_scaffold_3884_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15367..15810)
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein
id=5103856 Tax=CG_Woesearch_02
id=5103856 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_3884_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15807..16346)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein Tax=CG_Woesearch_02
id=3832835 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_3884_18
unknown

Not on your lists

comp(16433..16585)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_19
unknown

Not on your lists

16767..17765
-----------------
DNA (999bp)
protein (333aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

17805..18389
-----------------
DNA (585bp)
protein (195aa)
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_02_scaffold_3884_21
unknown

Not on your lists

comp(18643..19224)
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_22
unknown

Not on your lists

19408..19842
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_23
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(19784..20254)
-----------------
DNA (471bp)
protein (157aa)
Vitamin K epoxide reductase id=2262866 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
vitamin K epoxide reductase Tax=GWC2_Chloroflexi_49_37_curated
hypothetical protein
rifcsphigho2_02_scaffold_3884_24

Not on your lists

20341..23544
-----------------
DNA (3204bp)
protein (1068aa)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:KHO51441.1}; EC=6.1.1.5 {ECO:0000313|EMBL:KHO51441.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
rifcsphigho2_02_scaffold_3884_25
unknown

Not on your lists

comp(23519..24127)
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

24753..25295
-----------------
DNA (543bp)
protein (181aa)
id=5044628 Tax=CG_Woesearch_02
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3884_27
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(25336..25968)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
glo:Glov_0039 hypothetical protein id=3376 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
rifcsphigho2_02_scaffold_3884_28
unknown

Not on your lists

comp(26055..26240)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3884_29

Not on your lists

26309..26581
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:EQD57375.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rifcsphigho2_02_scaffold_3884_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

26641..27537
-----------------
DNA (897bp)
protein (299aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Woesearch_02
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying items 1-30 of 35 in total

View Taxonomy