ggKbase home page

rifcsphigho2_02_scaffold_8606

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_8606_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

2..1375
-----------------
DNA (1374bp)
protein (458aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QF27_SHELP
serine proteinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
glycoside hydrolase family 18
rifcsphigho2_02_scaffold_8606_2
unknown

Not on your lists

1386..2630
-----------------
DNA (1245bp)
protein (415aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8606_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2749..3156)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_8606_4
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

3265..3795
-----------------
DNA (531bp)
protein (177aa)
Protein GrpE id=1251048 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
grpE; molecular chaperone GrpE; K03687 molecular chaperone GrpE Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
grpE; Heat shock protein GrpE
rifcsphigho2_02_scaffold_8606_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3792..4304
-----------------
DNA (513bp)
protein (171aa)
Uncharacterised protein family UPF0153 Tax=CG_Woesearch_02
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_8606_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4344..4697
-----------------
DNA (354bp)
protein (118aa)
seg Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_8606_7
unknown

Not on your lists

4694..5146
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8606_8
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

5143..5721
-----------------
DNA (579bp)
protein (193aa)
Conserved Archaeal protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
Conserved Archaeal protein id=4685171 bin=GWC2_CP_Nitrospirae-rel_42_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
rifcsphigho2_02_scaffold_8606_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5727..7565
-----------------
DNA (1839bp)
protein (613aa)
Chaperone protein DnaK n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPI9_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
rifcsphigho2_02_scaffold_8606_10
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7800..8438
-----------------
DNA (639bp)
protein (213aa)
Metal dependent phosphohydrolase id=3537767 bin=GWC2_Planctomycetes_45_44 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
metal dependent phosphohydrolase Tax=GWC2_Planctomycetes_45_44_curated
rifcsphigho2_02_scaffold_8606_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8538..9617
-----------------
DNA (1080bp)
protein (360aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=CG_Woesearch_02
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chaperone protein DnaJ
rifcsphigho2_02_scaffold_8606_12
unknown

Not on your lists

comp(9642..10307)
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8606_13
Nanoarchaeum equitans, Nanoarchaeum, Nanoarchaeota, Archaea

Not on your lists

10427..11038
-----------------
DNA (612bp)
protein (204aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=228908 species="Archaea; Nanoarchaeota; Nanoarchaeum.;" source="Nanoarchaeum equitans
Nucleoside diphosphate kinase n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74NI4_NANEQ
nucleoside diphosphate kinase
rifcsphigho2_02_scaffold_8606_14
unknown

Not on your lists

comp(11035..11379)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8606_15
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists

11507..12490
-----------------
DNA (984bp)
protein (328aa)
Two-component sensor kinase {ECO:0000313|EMBL:KKU28614.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
Two-component sensor kinase id=3012984 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rifcsphigho2_02_scaffold_8606_16
unknown

Not on your lists

12536..12823
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsphigho2_02_scaffold_8606_17
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12828..13724)
-----------------
DNA (897bp)
protein (299aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AET64381.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Metha
Displaying 17 items

View Taxonomy