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rifcsphigho2_02_scaffold_16354

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16354_1
RIFOXYA1_FULL_OP11_Woesebacteria_43_9_curated, Woesebacteria, Microgenomates, Bacteria

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99..1544
-----------------
DNA (1446bp)
protein (482aa)
AAA ATPase n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V894_SULSY
TPR domain protein Tax=RIFOXYA1_FULL_OP11_Woesebacteria_43_9_curated
ATPase AAA
rifcsphigho2_02_scaffold_16354_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1549..2232
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CC783
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_16354_3
unknown

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comp(2229..2474)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_4

Not on your lists

2654..2935
-----------------
DNA (282bp)
protein (94aa)
hypothetical protein id=5050137 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45070.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_16354_5
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3039..3440)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771515
hypothetical protein Tax=AR9
Protein containing Nucleotide binding protein, PINc protein
rifcsphigho2_02_scaffold_16354_6
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(3441..3674)
-----------------
DNA (234bp)
protein (78aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJC6_9ZZZZ
hypothetical protein
hypothetical protein Tax=CG_Pacearch_02
rifcsphigho2_02_scaffold_16354_7
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3762..6320)
-----------------
DNA (2559bp)
protein (853aa)
AMP-dependent synthetase and ligase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4C4_GEODF
AMP-dependent synthetase and ligase
Acyl-(Acyl carrier protein) ligase, acyl carrier, (Acyl)-sn-glycerol-3-phosphate acyltransferase fusion protein {ECO:0000313|EMBL:ACM21579.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaprot
rifcsphigho2_02_scaffold_16354_8

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comp(6365..6598)
-----------------
DNA (234bp)
protein (78aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIU8_9CLOT
Marine sediment metagenome DNA, contig: S01H4_S05225 {ECO:0000313|EMBL:GAH03154.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_16354_9
unknown

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comp(6678..7331)
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_10
unknown

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7408..7617
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_11

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comp(7679..8380)
-----------------
DNA (702bp)
protein (234aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsphigho2_02_scaffold_16354_12

Not on your lists

comp(8386..8922)
-----------------
DNA (537bp)
protein (179aa)
id=5050195 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44976.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_16354_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8972..9265)
-----------------
DNA (294bp)
protein (98aa)
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5044918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA polymerase dimerization Tax=RBG_13_Woesearchaeota_36_6_curated
RNA polymerase dimerization
rifcsphigho2_02_scaffold_16354_14
unknown

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comp(10053..10193)
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_15

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11069..11815
-----------------
DNA (747bp)
protein (249aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_16354_16

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11828..12370
-----------------
DNA (543bp)
protein (181aa)
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46981.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_16354_17
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(12339..12875)
-----------------
DNA (537bp)
protein (179aa)
id=5047512 Tax=CG_Woesearch_03
id=5800460 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_16354_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(14171..14872)
-----------------
DNA (702bp)
protein (234aa)
3-isopropylmalate dehydratase; K06869 uncharacterized protein Tax=CG_Woesearch_01
hypothetical protein; K06869 uncharacterized protein id=5041645 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_16354_19
unknown

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comp(14877..15086)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_20
AR4, Woesearchaeaota, DPANN, Archaea

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comp(15140..16549)
-----------------
DNA (1410bp)
protein (470aa)
ATPase; K06921 id=5041705 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase; K06921 Tax=AR4
DEXX-box atpase
rifcsphigho2_02_scaffold_16354_21
unknown

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17076..17798
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_22
unknown

Not on your lists

17812..18348
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16354_23
unknown

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18350..19411
-----------------
DNA (1062bp)
protein (354aa)

This feature has no annotations

Displaying 23 items

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