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rifcsphigho2_02_scaffold_23953

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23953_1
unknown

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2..130
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23953_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(144..1481)
-----------------
DNA (1338bp)
protein (446aa)
DNA primase Tax=CG_Woesearch_02
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_23953_3
AR9, Woesearchaeaota, DPANN, Archaea

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2064..2795
-----------------
DNA (732bp)
protein (244aa)
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] Tax=AR9
Serine/threonine protein kinase involved in cell cycle control id=5800010 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative serine/threonine protein kinase
rifcsphigho2_02_scaffold_23953_4
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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2792..3184
-----------------
DNA (393bp)
protein (131aa)
Putative uncharacterized protein n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SQD2_IGNAA
Uncharacterized protein {ECO:0000313|EMBL:ADM27082.1}; TaxID=583356 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignisphaera.;" source="Ignisphaera aggregans (
hypothetical protein
rifcsphigho2_02_scaffold_23953_5
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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3181..3648
-----------------
DNA (468bp)
protein (156aa)
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeo
Riboflavin synthase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGW6_ARCPA
rifcsphigho2_02_scaffold_23953_6

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3620..4063
-----------------
DNA (444bp)
protein (148aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=5043977 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
rifcsphigho2_02_scaffold_23953_7
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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4060..5112
-----------------
DNA (1053bp)
protein (351aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YVM7_9THEM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=688269 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga thermarum
rifcsphigho2_02_scaffold_23953_8

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5127..5684
-----------------
DNA (558bp)
protein (186aa)
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO45503.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
KH domain protein
rifcsphigho2_02_scaffold_23953_9
CG_Woesearch_02, Woesearchaeota, Archaea

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5881..6879
-----------------
DNA (999bp)
protein (333aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Woesearch_02
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_23953_10

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6876..7562
-----------------
DNA (687bp)
protein (229aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_23953_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7784..8890
-----------------
DNA (1107bp)
protein (369aa)
Type 2 DNA topoisomerase 6 subunit A; K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_23953_12
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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8996..10267
-----------------
DNA (1272bp)
protein (424aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F282_9BACT
AAA ATPase Tax=GWA1_Berkelbacteria_36_10
putative ATPase (AAA+ superfamily)
rifcsphigho2_02_scaffold_23953_13
R_OP11_Woesebacteria_40_22, Woesebacteria, Microgenomates, Bacteria

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10446..10952
-----------------
DNA (507bp)
protein (169aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_40_22_curated
rifcsphigho2_02_scaffold_23953_trna_1
unknown

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11162..11232
-----------------
DNA (71bp)
transferRNA
rifcsphigho2_02_scaffold_23953_14
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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11240..11971
-----------------
DNA (732bp)
protein (244aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B6P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90520.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
rifcsphigho2_02_scaffold_23953_15
AR4, Woesearchaeaota, DPANN, Archaea

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11964..12728
-----------------
DNA (765bp)
protein (255aa)
methyltransferase (EC:2.1.1.-); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5047417 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
methyltransferase (EC:2.1.1.-); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=AR4
tRNA (adenine-n(1)-)-methyltransferase
rifcsphigho2_02_scaffold_23953_16

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comp(12730..13488)
-----------------
DNA (759bp)
protein (253aa)
transcriptional regulator TrmB id=5044016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO46859.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_23953_17
unknown

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13552..14163
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

Displaying 18 items

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