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rifcsphigho2_02_scaffold_7331

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7331_1
unknown

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3..455
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7331_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

452..1429
-----------------
DNA (978bp)
protein (326aa)
PROKAR_LIPOPROTEIN Tax=CG_Woesearch_02
PROKAR_LIPOPROTEIN id=5800185 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7331_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1513..2433
-----------------
DNA (921bp)
protein (307aa)
PROKAR_LIPOPROTEIN Tax=CG_Woesearch_02
id=5046358 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_7331_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2449..3414
-----------------
DNA (966bp)
protein (322aa)
id=5800187 Tax=CG_Woesearch_02
id=5800187 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7331_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3683..4636)
-----------------
DNA (954bp)
protein (318aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Woesearch_02
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5041786 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Replication factor C small subunit
rifcsphigho2_02_scaffold_7331_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4733..5008)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein Tax=CG_Woesearch_02
PRC-barrel domain protein id=5800189 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PRC-barrel protein
rifcsphigho2_02_scaffold_7331_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

5357..6433
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Woesearch_01
TIDP3108; LOC100282839 (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=5046353 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tyrosyl-tRNA synthetase (EC:6.1.1.1)
rifcsphigho2_02_scaffold_7331_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6430..7500
-----------------
DNA (1071bp)
protein (357aa)
PepQ-2 cobalt-dependent proline dipeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] id=5041800 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Xaa-Pro aminopeptidase Tax=AR11
peptidase M24
rifcsphigho2_02_scaffold_7331_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7544..8692
-----------------
DNA (1149bp)
protein (383aa)
proteasome-activating nucleotidase; K03420 proteasome regulatory subunit Tax=RBG_13_Woesearchaeota_36_6_curated
NEQ186 id=5800112 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proteasome-activating nucleotidase
rifcsphigho2_02_scaffold_7331_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(9016..9843)
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=5041808 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_7331_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9837..10751)
-----------------
DNA (915bp)
protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SP39_CLOC7 id=5103189 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_7331_12

Not on your lists

comp(10708..11730)
-----------------
DNA (1023bp)
protein (341aa)
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
flap endonuclease-1
rifcsphigho2_02_scaffold_7331_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11754..12680)
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7331_14
unknown

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12796..13404
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7331_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(13417..13953)
-----------------
DNA (537bp)
protein (179aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
rifcsphigho2_02_scaffold_7331_16
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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14715..15461
-----------------
DNA (747bp)
protein (249aa)
rnase z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZ11_METFV
rifcsphigho2_02_scaffold_7331_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15442..15669)
-----------------
DNA (228bp)
protein (76aa)
Histone, HmtA n=4 Tax=Methanobrevibacter RepID=A5ULH1_METS3 id=5103251 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
archaeal histone Tax=CG_Pacearch_04
Histone, HmtA
rifcsphigho2_02_scaffold_7331_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

15801..16028
-----------------
DNA (228bp)
protein (76aa)
seg id=5041816 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_7331_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16037..16951
-----------------
DNA (915bp)
protein (305aa)
translation initiation factor, aIF-2BII family (EC:5.3.1.23); K03680 translation initiation factor eIF-2B subunit delta id=5096039 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
translation initiation factor, aIF-2BII family (EC:5.3.1.23)
translation initiation factor IF-2B subunit delta; K03680 translation initiation factor eIF-2B subunit delta Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_7331_20

Not on your lists

comp(16958..17455)
-----------------
DNA (498bp)
protein (166aa)
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsphigho2_02_scaffold_7331_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(17649..18143)
-----------------
DNA (495bp)
protein (165aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type Tax=CG_Woesearch_01
Holliday junction-type resolvase; K03552 holliday junction resolvase, archaea type id=5041814 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Resolvase, Holliday junction-type
rifcsphigho2_02_scaffold_7331_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18427..19119)
-----------------
DNA (693bp)
protein (231aa)
NEQ098 Tax=AR11
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_7331_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

19954..20922
-----------------
DNA (969bp)
protein (323aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF40_9EURY id=5103158 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 Tax=RBG_13_Woesearchaeota_36_6_curated
ORC1-type DNA replication protein
rifcsphigho2_02_scaffold_7331_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20955..22451
-----------------
DNA (1497bp)
protein (499aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5046338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_7331_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22448..26047
-----------------
DNA (3600bp)
protein (1200aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II large subunit n=1 Tax=nanoarchaeote Nst1 RepID=R1E5T5_9ARCH id=5103156 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase II large subunit
rifcsphigho2_02_scaffold_7331_26

Not on your lists

comp(26058..26876)
-----------------
DNA (819bp)
protein (273aa)
hypothetical protein
Uncharacterized membrane protein id=5042271 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46769.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_7331_trna_2
unknown

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comp(27396..27470)
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_7331_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27739..28611
-----------------
DNA (873bp)
protein (291aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IVI6_THEET
LipA2; lipoyl synthase
rifcsphigho2_02_scaffold_7331_28
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

28608..28901
-----------------
DNA (294bp)
protein (98aa)
Lipoate protein ligase Tax=RBG_13_Euryarchaeota_31_8_curated
hypothetical protein
hypothetical protein id=5240859 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_7331_29
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

28877..29656
-----------------
DNA (780bp)
protein (260aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2W2_SPICH
biotin/lipoate A/B protein ligase
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:AEJ19870.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51
Displaying items 1-30 of 35 in total

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