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rifcsphigho2_02_scaffold_34210

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_34210_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1046)
-----------------
DNA (1044bp)
protein (348aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
Aminotransferase class-III n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQM3_9EURY
Aminotransferase class-III {ECO:0000313|EMBL:EFW93287.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
rifcsphigho2_02_scaffold_34210_2
unknown

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1094..1480
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_3
unknown

Not on your lists

2158..3288
-----------------
DNA (1131bp)
protein (377aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_4
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3348..5030
-----------------
DNA (1683bp)
protein (561aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chrooco
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JJT4_SYNJB rbh
rifcsphigho2_02_scaffold_34210_5
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

5042..6181
-----------------
DNA (1140bp)
protein (380aa)
Succinate dehydrogenase, Fe-S protein subunit {ECO:0000313|EMBL:CCQ92040.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CCQ92040.1};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitro
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase, Fe-S protein subunit n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNE9_9BACT
rifcsphigho2_02_scaffold_34210_6
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6347..7093
-----------------
DNA (747bp)
protein (249aa)
heterodisulfide reductase subunit B (EC:1.3.5.1)
Heterodisulfide reductase, subunit B {ECO:0000313|EMBL:AFY83159.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AFY83159.1};; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Osc
heterodisulfide reductase n=1 Tax=Geminocystis herdmanii RepID=UPI0003482BD4
rifcsphigho2_02_scaffold_34210_7
unknown

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comp(7100..7510)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_8
unknown

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comp(7550..7936)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_9

Not on your lists

comp(8028..10349)
-----------------
DNA (2322bp)
protein (774aa)
polB; DNA polymerase II (EC:2.7.7.7); K02336 DNA polymerase II [EC:2.7.7.7] id=5046297 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_34210_trna_1
unknown

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11011..11085
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_34210_trna_2
unknown

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11325..11421
-----------------
DNA (97bp)
transferRNA
rifcsphigho2_02_scaffold_34210_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11589..12191
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein
id=5103412 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103412 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_34210_11

Not on your lists

12188..12694
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein
id=5045766 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54433.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_34210_12
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(12884..13291)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003727C46
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKU73690.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_34210_13
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13343..13840)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSA0_VULDI id=5103607 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K09150 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
hypothetical protein
rifcsphigho2_02_scaffold_34210_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13936..14502
-----------------
DNA (567bp)
protein (189aa)
Metal dependent phosphohydrolase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TS25_THETC
putative HD superfamily hydrolase Tax=CG_Woesearch_02
metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_34210_15
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14502..14945
-----------------
DNA (444bp)
protein (148aa)
Pyridoxamine 5'-phosphate oxidase
pyridoxamine 5'-phosphate oxidase id=24626218 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Pyridoxamine-phosphate oxidase {ECO:0000313|EMBL:ERG98152.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07
rifcsphigho2_02_scaffold_34210_16
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

14964..15539
-----------------
DNA (576bp)
protein (192aa)
type 11 methyltransferase Tax=GWF2_Lentisphaerae_44_16_curated
SAM-dependent methlyltransferase
Ribosomal RNA adenine dimethylase domain-containing protein id=4034452 bin=GWF2_Lentisphaerae_52_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rifcsphigho2_02_scaffold_34210_17

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comp(15567..16142)
-----------------
DNA (576bp)
protein (192aa)
Ham1 family n=1 Tax=uncultured bacterium RepID=K2CUW0_9BACT
Ham1 family {ECO:0000313|EMBL:EKD78284.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative deoxyribonucleotide triphosphate pyrophosphatase
rifcsphigho2_02_scaffold_34210_18
R_OP11_Curtissbacteria_40_11, Curtissbacteria, Microgenomates, Bacteria

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comp(16430..16750)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI000378A12E
Nudix hydrolase Tax=RIFCSPLOWO2_02_FULL_OP11_Curtissbacteria_40_11_curated
MutT-like protein
rifcsphigho2_02_scaffold_34210_19
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

16831..17376
-----------------
DNA (546bp)
protein (182aa)
nicotinamide-nucleotide adenylyltransferase; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] id=5096382 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
nicotinamide-nucleotide adenylyltransferase; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=PER_GWF2_38_29
nicotinamide-nucleotide adenylyltransferase
rifcsphigho2_02_scaffold_34210_trna_3
unknown

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comp(17358..17431)
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_34210_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17905..18126
-----------------
DNA (222bp)
protein (74aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone Tax=CG_Woesearch_02
histone HMtA2
rifcsphigho2_02_scaffold_34210_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(18129..18842)
-----------------
DNA (714bp)
protein (238aa)
ATP-NAD/AcoX kinase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9R6_9BACT id=35842 bin=ACD30 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
ATP-NAD/AcoX kinase Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_02_scaffold_34210_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18887..19459)
-----------------
DNA (573bp)
protein (191aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_02
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
HIT-family protein
rifcsphigho2_02_scaffold_34210_23
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(19456..20301)
-----------------
DNA (846bp)
protein (282aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_03
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045851 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_34210_24
unknown

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20309..21025
-----------------
DNA (717bp)
protein (239aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_25
unknown

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comp(21013..21141)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_26
unknown

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comp(21587..21703)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34210_27

Not on your lists

comp(21900..22601)
-----------------
DNA (702bp)
protein (234aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=uncultured bacterium RepID=K2AHM1_9BACT
Displaying items 1-30 of 36 in total

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