ggKbase home page

rifcsphigho2_02_scaffold_34312

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_34312_1
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..261
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKB16963.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
rifcsphigho2_02_scaffold_34312_2
unknown

Not on your lists

comp(669..1040)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34312_3

Not on your lists

comp(1126..1359)
-----------------
DNA (234bp)
protein (78aa)
Putative uncharacterized protein id=5046892 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54285.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_02_scaffold_34312_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1362..1649)
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=85888 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsphigho2_02_scaffold_34312_5
unknown

Not on your lists

comp(1646..1990)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34312_6
unknown

Not on your lists

comp(2271..2450)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34312_7

Not on your lists

2500..2772
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52222.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5048668 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_34312_8

Not on your lists


comp(2875..3075)
-----------------
DNA (201bp)
protein (67aa)
50S ribosomal protein L35Ae n=1 Tax=sediment metagenome RepID=D9PEX7_9ZZZZ
Large subunit ribosomal protein L35Ae {ECO:0000313|EMBL:KHO50602.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L35Ae
rifcsphigho2_02_scaffold_34312_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3536..4069
-----------------
DNA (534bp)
protein (178aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_34312_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

4059..4691
-----------------
DNA (633bp)
protein (211aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_34312_11
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4678..5775)
-----------------
DNA (1098bp)
protein (366aa)
thrC-3; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:CAJ35510.1}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945, ECO:0000313|EMBL:CAJ35510.1};; TaxID=351160 species="Archaea; Euryarchaeota;
Threonine synthase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7Y3_UNCMA rbh
rifcsphigho2_02_scaffold_34312_12
unknown

Not on your lists

comp(5862..6149)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsphigho2_02_scaffold_34312_13

Not on your lists

comp(6225..7121)
-----------------
DNA (897bp)
protein (299aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] id=5240722 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1579370 species="Archaea.;" sour
rifcsphigho2_02_scaffold_34312_14
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

comp(7253..8557)
-----------------
DNA (1305bp)
protein (435aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GK07_CALEA
hypothetical protein Tax=RBG_13_Aminicenantes_64_14_curated
hypothetical protein
Displaying 14 items

View Taxonomy