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rifcsphigho2_02_scaffold_11369

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_11369_1
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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2..4984
-----------------
DNA (4983bp)
protein (1661aa)
periplasmic copper-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
Halomucin id=4379343 bin=PER_GWC2_41_7 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
type I secretion target repeat protein
rifcsphigho2_02_scaffold_11369_2

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4995..5807
-----------------
DNA (813bp)
protein (271aa)
Site-determining protein {ECO:0000313|EMBL:KHO52158.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cell division ATPase MinD; K03609 septum site-determining protein MinD id=5047336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
iron-sulfur cluster carrier protein
rifcsphigho2_02_scaffold_11369_3
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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5804..6880
-----------------
DNA (1077bp)
protein (359aa)
id=4379344 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
id=4379344 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_11369_4
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(6975..7481)
-----------------
DNA (507bp)
protein (169aa)
bifunctional deaminase-reductase domain-containing protein Tax=CG_Pacearch_06
dihydrofolate reductase-like protein id=5042048 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Bifunctional deaminase-reductase protein
rifcsphigho2_02_scaffold_11369_5
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

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comp(7897..8355)
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein
hypothetical protein id=5241303 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
rifcsphigho2_02_scaffold_11369_6
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8463..9335)
-----------------
DNA (873bp)
protein (291aa)
Chemotaxis sensory transducer n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLQ7_CLOSH
multi-sensor signal transduction histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
methyl-accepting chemotaxis sensory transducer
rifcsphigho2_02_scaffold_11369_7
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(9368..10387)
-----------------
DNA (1020bp)
protein (340aa)
putative circadian clock protein KaiC (EC:2.7.11.1) id=5241500 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RecA-superfamily ATPases implicated in signal transduction Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
rifcsphigho2_02_scaffold_11369_8

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comp(10432..11679)
-----------------
DNA (1248bp)
protein (416aa)
Two component system histidine kinase n=1 Tax=uncultured bacterium RepID=K1Y5V3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM92979.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sensor with HAMP domain-containing protein
Displaying 8 items

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