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rifcsphigho2_02_scaffold_30800

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_30800_1

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comp(2..175)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein id=5044933 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46029.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_30800_2
AR4, Woesearchaeaota, DPANN, Archaea

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387..1019
-----------------
DNA (633bp)
protein (211aa)
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
small GTP-binding protein; K06883 Tax=AR4
Small GTP-binding protein
rifcsphigho2_02_scaffold_30800_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1025..1414
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein
Uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5044929 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_30800_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1417..1812
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein; K07163 Tax=CG_Woesearch_02
hypothetical protein; K07163 id=5044928 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Zn-ribbon containing protein
rifcsphigho2_02_scaffold_30800_5

Not on your lists

comp(1830..2921)
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein
DHH phosphoesterases id=5240803 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59795.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_30800_6
unknown

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comp(3329..3736)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_02_scaffold_30800_7
unknown

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comp(3809..4255)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsphigho2_02_scaffold_30800_8

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4946..5899
-----------------
DNA (954bp)
protein (318aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_L00346 {ECO:0000313|EMBL:GAF82218.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SpoVT/AbrB protein
rifcsphigho2_02_scaffold_30800_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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5892..7421
-----------------
DNA (1530bp)
protein (510aa)
Diguanylate cyclase id=3692745 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
diguanylate cyclase Tax=GWF2_WOR_2_43_52_curated
diguanylate cyclase domain-containing protein
rifcsphigho2_02_scaffold_30800_10
unknown

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7729..7959
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_30800_11

Not on your lists

comp(8007..8357)
-----------------
DNA (351bp)
protein (117aa)
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46770.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_30800_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8347..9123)
-----------------
DNA (777bp)
protein (259aa)
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_30800_13
AR4, Woesearchaeaota, DPANN, Archaea

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9211..9822
-----------------
DNA (612bp)
protein (204aa)
seg id=5041693 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_30800_14
CG_Woesearch_03, Woesearchaeota, Archaea

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9875..10405
-----------------
DNA (531bp)
protein (177aa)
id=5041692 Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_30800_15

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10409..10909
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47943.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_30800_trna_1
unknown

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11111..11198
-----------------
DNA (88bp)
transferRNA
rifcsphigho2_02_scaffold_30800_16
AR18, Woesearchaeaota, DPANN, Archaea

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11279..11755
-----------------
DNA (477bp)
protein (159aa)
id=5048266 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_30800_17
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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11752..12390
-----------------
DNA (639bp)
protein (213aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B55657
adenylate kinase
rifcsphigho2_02_scaffold_30800_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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12457..13050
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein
id=5045765 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5103355 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_30800_19
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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13037..13429
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A6D1A
hypothetical protein
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_02_scaffold_30800_20

Not on your lists

comp(13644..14603)
-----------------
DNA (960bp)
protein (320aa)
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO47933.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Displaying 21 items

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