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rifcsphigho2_02_scaffold_54246

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_54246_1
unknown

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comp(375..605)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54246_2
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(919..1200)
-----------------
DNA (282bp)
protein (94aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alkylhydroperoxidase n=1 Tax=Bacillus acidiproducens RepID=UPI000381992F
alkylhydroperoxidase
rifcsphigho2_02_scaffold_54246_3
unknown

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comp(1255..1659)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54246_4
AR18, Woesearchaeaota, DPANN, Archaea

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1745..2179
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein
Putative uncharacterized protein id=5049632 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative uncharacterized protein Tax=AR18
rifcsphigho2_02_scaffold_54246_5
CG_Woesearch_02, Woesearchaeota, Archaea

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2176..3462
-----------------
DNA (1287bp)
protein (429aa)
hypothetical protein Tax=CG_Woesearch_02
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_54246_6
unknown

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3475..3726
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54246_7

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comp(3775..4467)
-----------------
DNA (693bp)
protein (231aa)
riboflavin biosynthesis GTP cyclohydrolase II RibA (EC:3.5.4.25)
Marine sediment metagenome DNA, contig: S06H3_C00128 {ECO:0000313|EMBL:GAH93839.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
3,4-dihydroxy-2-butanone 4-phosphate synthase id=3790123 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rifcsphigho2_02_scaffold_54246_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(4407..4958)
-----------------
DNA (552bp)
protein (184aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV88_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Ace
3,4-dihydroxy-2-butanone 4-phosphate synthase
rifcsphigho2_02_scaffold_54246_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5048..5968)
-----------------
DNA (921bp)
protein (307aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=RBG_13_Woesearchaeota_36_6_curated
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_54246_10
unknown

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comp(6248..7105)
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsphigho2_02_scaffold_54246_trna_1
unknown

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7228..7311
-----------------
DNA (84bp)
transferRNA
Displaying 11 items

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