ggKbase home page

rifcsphigho2_02_scaffold_55123

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_55123_1
unknown

Not on your lists

comp(462..1358)
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_2
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1426..1572)
-----------------
DNA (147bp)
protein (49aa)
Winged helix-turn helix n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T7W2_9EURY
Winged helix-turn helix {ECO:0000313|EMBL:EMR74909.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
rifcsphigho2_02_scaffold_55123_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1842..3131
-----------------
DNA (1290bp)
protein (430aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Woesearch_02
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5048096 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
serS; seryl-tRNA synthetase (EC:6.1.1.11)
rifcsphigho2_02_scaffold_55123_4
unknown

Not on your lists

3181..3468
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3680..4753
-----------------
DNA (1074bp)
protein (358aa)
cell division control protein 6 Tax=CG_Woesearch_02
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
rifcsphigho2_02_scaffold_55123_6
unknown

Not on your lists

comp(4881..4970)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5072..5794
-----------------
DNA (723bp)
protein (241aa)
vacuolar iron transporter family protein Tax=CSP1_2_Dadabacteria
vacuolar iron transporter family protein id=14426555 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
rifcsphigho2_02_scaffold_55123_8
unknown

Not on your lists

6039..6185
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

6299..6871
-----------------
DNA (573bp)
protein (191aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein MJ0062 id=5799697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Sua5/YciO/YrdC/YwlC family protein
rifcsphigho2_02_scaffold_55123_10

Not on your lists

6937..7389
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
Metallophosphoesterase
Marine sediment metagenome DNA, contig: S01H1_L02165 {ECO:0000313|EMBL:GAF71261.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_55123_11
unknown

Not on your lists

7386..7856
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7931..8536
-----------------
DNA (606bp)
protein (202aa)
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
rifcsphigho2_02_scaffold_55123_13
unknown

Not on your lists

8767..9147
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_14
unknown

Not on your lists

9149..9634
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsphigho2_02_scaffold_55123_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9842..11194
-----------------
DNA (1353bp)
protein (451aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RBG_16_Archaea_50_20_curated
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=18248948 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribulose bisphosphate carboxylase I (EC:4.1.1.39)
rifcsphigho2_02_scaffold_55123_16
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11187..12125)
-----------------
DNA (939bp)
protein (313aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=CG_Falkow_02
phosphoenolpyruvate synthase (EC:2.7.9.2)
Pyruvate, water dikinase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUF2_9FIRM id=136459 bin=ACD8 species=Peptoniphilus lacrimalis genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Displaying 16 items

View Taxonomy