ggKbase home page

rifcsphigho2_02_scaffold_106135

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_106135_1
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

1..903
-----------------
DNA (903bp)
protein (301aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=Altiarchaeum hamiconexum
DEAD/DEAH box helicase-like protein id=5046902 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA helicase, superfamily II
rifcsphigho2_02_scaffold_106135_2

Not on your lists

comp(1761..2144)
-----------------
DNA (384bp)
protein (128aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=uncultured bacterium RepID=K2AIL4_9BACT
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:EKD49749.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cysteine methyltransferase
rifcsphigho2_02_scaffold_106135_3
unknown

Not on your lists

comp(2206..2832)
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

rifcsphigho2_02_scaffold_106135_4
unknown

Not on your lists

2956..3441
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

rifcsphigho2_02_scaffold_106135_5

Not on your lists

3481..3948
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein id=5042262 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46760.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_106135_6
unknown

Not on your lists

comp(4010..4474)
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_02_scaffold_106135_7
unknown

Not on your lists

comp(4508..4810)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_106135_8
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4887..5645
-----------------
DNA (759bp)
protein (253aa)
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=GWA2_Deltaproteobacteria_45_12_curated
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Exodeoxyribonuclease III Xth n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VFU8_METM7
rifcsphigho2_02_scaffold_106135_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5661..6080)
-----------------
DNA (420bp)
protein (140aa)
Nucleotide-binding protein, PIN domain-containing protein Tax=AR9
hypothetical protein id=5044683 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nucleotide-binding protein, PIN domain-containing protein
rifcsphigho2_02_scaffold_106135_10
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6077..6337)
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein Tax=AR9
hypothetical protein id=5044684 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_106135_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

6588..6830
-----------------
DNA (243bp)
protein (81aa)
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_02_scaffold_106135_12
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

6827..7132
-----------------
DNA (306bp)
protein (102aa)
Transcription regulator AbrB/SpoV, predicted id=5041830 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
Displaying 12 items

View Taxonomy