ggKbase home page

rifcsphigho2_02_scaffold_5283_22

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_39_9

near complete RP 34 / 55 MC: 5 BSCG 14 / 51 ASCG 32 / 38 MC: 1
Location: comp(16333..18081)

Top 3 Functional Annotations

Value Algorithm Source
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 581.0
  • Bit_score: 624
  • Evalue 1.90e-175
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 590.0
  • Bit_score: 592
  • Evalue 3.40e-166
SecD/SecF/SecDF export membrane protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 503.0
  • Bit_score: 406
  • Evalue 1.70e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 1749
ATGAATGAAACCGTAAAGAAATTTCTCACCAATGGAAGAATTATTACACTTGTCATATTTCTTATTTTAGCACTTGTTGCAATTCATCCAAAGTTTTGGGTTGAGGGTGTTGCTATTCGTAACGTGCAGATGAATTCAAGTGCCGCACTCGCAGGGATTGAAAATCCTAAGCCGACAGCGGCCCCTACGTCCAGGGAAATTATTTCATCTATGAACGGGCAGCCGATTAAGAATGTTGAAGATTATACTAATTTTGTAAAGCTTCTCCAGCCTAATCAAACTATCACCATTCAAACTAACAAGGCATTGTATAGTTTAACGACACGGGAAAAAATGAAGATTATCGGTTATGAAAATATTACAGAAGAACAAACAAAGCAGGTACCGCAAAATGTTTCGCAGCAGAATGGTTCTTTGACGAATGTAACTACTAATGTAACTAAGACTGAAAATGTCACAACAAATGTCACAATAGAGGTTCCAATAACGATTGCTGAGGGCATGGAGTCTCTTGGCCTCACTATCTATCAATCTCCTACATCTAATTTACGTCAGGGCCTTGACTTGCAGGGTGGAACAAGGGTTGTTCTCCAACCTGAAGTAGAGCAGAGCAAGGAAGATATGGAAACCATTCTTTCAAATATGAAGGAACGTCTCAATGTCTATGGTTTAAGTGACGTGATTGTGCACGAAGCAGGCGATCTTTCCGGGAATCAATACATTGTTGTAGAAATCGCTGGCGCAAATGAGGAGGAAGTCAAAAATCTTCTCGCAAAGCAAGGAAAATTTGAAGCAAAGATCGGCAACACAACCGTCTTTAGAGGTGGGAAAGATATCACCTATGTATGCAGGTCTGCAGATTGTTCAGGCATCGACTCAAGAACAGGATGTTCCCAATCTAACTCTCAATGGCTCTGTGGGTTTCAATTCGCAATCTCTTTAAGTCCTGAGGCCGCTCAGGGCCAGGCTGATGCAACGCGTAATTTAGCTGTTGTGCCAGGCGGGGGAAACGATCCTGTGTTGAGTGAAAAGATAGAATTTTATCTTGATGACCAACTTGTGGATGCCCTTAACATTGGTGCTGAACTGAGGGGAAGGGCTACAACCGACATCTCTATCAGAGGATCTGGCTCTGGAATTTCCCAGCCCGATGCTGTAACGAACACCTTAGAGAGTATGAAGCGTTTGCAGACGATTTTAACGACGGGTTCCCTGCCAGTAAAGATGAACATTGTGAGAACAGATAATTTAAGTGCTGTCCTTGGAAAACAATTCTTGCAGAATGCGATTCTCATTGGTATTGTTGCTCAACTAGCAGTGTGCCTGGTTATTTTCCTTGGCTATCGCTCCTTGAAGGTTGCTATCCCCATCCTGATTACGGGTACTTCGGAAGTCGTTCTCCTTCTGGGTCTTGCAGCACTCATTGGCTGGAATCTCGATCTCGCAGCTCTTGCAGGGATTATTATCTCTGTCGGTACGGGGGTTGACCACCAAATTGTGATTGCGGACGAGGTCCGTATGGGTACGAAAGAAAGCAAGGAATACTGGCTGAGAAAGCTCAAGCGCGCCTTCTTCATTATTATGACTGCATATGCAACTATGTTCGTCGCGATGGTTCCATTACTCTTCGCGGGCGCTGGCTTATTGAAGGGCTTTGCCTTAACTACTATTATGGGTTTCTCCTTTGGAGTATTCATATCTAGGCCTGCCTTCGCAGCTATGATTAAGATTCTCCATAAAGAACAATAA
PROTEIN sequence
Length: 583
MNETVKKFLTNGRIITLVIFLILALVAIHPKFWVEGVAIRNVQMNSSAALAGIENPKPTAAPTSREIISSMNGQPIKNVEDYTNFVKLLQPNQTITIQTNKALYSLTTREKMKIIGYENITEEQTKQVPQNVSQQNGSLTNVTTNVTKTENVTTNVTIEVPITIAEGMESLGLTIYQSPTSNLRQGLDLQGGTRVVLQPEVEQSKEDMETILSNMKERLNVYGLSDVIVHEAGDLSGNQYIVVEIAGANEEEVKNLLAKQGKFEAKIGNTTVFRGGKDITYVCRSADCSGIDSRTGCSQSNSQWLCGFQFAISLSPEAAQGQADATRNLAVVPGGGNDPVLSEKIEFYLDDQLVDALNIGAELRGRATTDISIRGSGSGISQPDAVTNTLESMKRLQTILTTGSLPVKMNIVRTDNLSAVLGKQFLQNAILIGIVAQLAVCLVIFLGYRSLKVAIPILITGTSEVVLLLGLAALIGWNLDLAALAGIIISVGTGVDHQIVIADEVRMGTKESKEYWLRKLKRAFFIIMTAYATMFVAMVPLLFAGAGLLKGFALTTIMGFSFGVFISRPAFAAMIKILHKEQ*