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rifcsphigho2_02_scaffold_5283

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5283_1
unknown

Not on your lists

3..215
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_2
unknown

Not on your lists

comp(230..808)
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_3
CG_PER_03, Peregrinibacteria, Bacteria

Not on your lists

comp(893..1111)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CC395
hypothetical protein Tax=CG_PER_03
hypothetical protein
rifcsphigho2_02_scaffold_5283_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1140..2399)
-----------------
DNA (1260bp)
protein (420aa)
AAA ATPase central domain-containing protein; K04800 replication factor C large subunit Tax=CG_Woesearch_01
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Replication factor C large subunit
rifcsphigho2_02_scaffold_5283_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2400..3404)
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
hypothetical protein id=5095236 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
rifcsphigho2_02_scaffold_5283_6

Not on your lists


3591..6011
-----------------
DNA (2421bp)
protein (807aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5048462 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579365 species="Archaea.;" source=
Valine-tRNA ligase
rifcsphigho2_02_scaffold_5283_7
unknown

Not on your lists

6117..6605
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_8
unknown

Not on your lists

6657..6860
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_9
unknown

Not on your lists

6857..7318
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_10
unknown

Not on your lists

comp(7324..7788)
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7785..8621)
-----------------
DNA (837bp)
protein (279aa)
Proliferating cell nuclear antigen n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6V3D4_9EURY
proliferating-cell nucleolar protein p120 Tax=RBG_13_Bathyarchaeota_46_16b_curated
RNA methylase
rifcsphigho2_02_scaffold_5283_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8603..10015)
-----------------
DNA (1413bp)
protein (471aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_Woesearch_02
Cysteine--tRNA ligase id=5799784 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cysteinyl-tRNA synthetase
rifcsphigho2_02_scaffold_5283_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(10102..10773)
-----------------
DNA (672bp)
protein (224aa)
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Woesearchaeota_36_6_curated
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase id=5799901 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibrillarin
rifcsphigho2_02_scaffold_5283_14
unknown

Not on your lists

comp(10782..11489)
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_15
unknown

Not on your lists

comp(11500..12225)
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(12222..13022)
-----------------
DNA (801bp)
protein (267aa)
hypothetical protein; K14564 nucleolar protein 56 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
rifcsphigho2_02_scaffold_5283_17
unknown

Not on your lists

comp(13070..13843)
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_18
unknown

Not on your lists

14445..14720
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5283_19
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14916..15581)
-----------------
DNA (666bp)
protein (222aa)
hypothetical protein; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=5048452 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
uridylate kinase
rifcsphigho2_02_scaffold_5283_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15581..15931)
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048451 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative membrane protein
rifcsphigho2_02_scaffold_5283_21

Not on your lists

comp(15933..16298)
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein id=5048450 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45484.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5283_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16333..18081)
-----------------
DNA (1749bp)
protein (583aa)
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Woesearch_02
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
Displaying 22 items

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