ggKbase home page

rifcsphigho2_02_scaffold_37641_6

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_39_9

near complete RP 34 / 55 MC: 5 BSCG 14 / 51 ASCG 32 / 38 MC: 1
Location: comp(4258..4689)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 143.0
  • Bit_score: 181
  • Evalue 8.10e-43
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 142.0
  • Bit_score: 180
  • Evalue 1.70e-42
rps19e; 30S ribosomal protein S19e similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 142.0
  • Bit_score: 175
  • Evalue 1.20e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 432
ATGAGTAGCATTTATGACGTACCAGCAAACGACCTGATTGCGAAGGTCACTGAAGAATTGAAGAAAAATAATAAGATTAAGCCTCCCGTTTGGAGCGTGTTCGCAAAAACAGGCGTTCACAAAGAAAGGCCGCCAATAAATCCAGAATGGTGGTATGTGCGCTGCGCGGCAGTCCTGAGAAAATTAAGTATCCGAGGTCCCATCGGGGTTTCCAAATTACGCTCACAATACGGTGGAAATAAGAACAGGGGAATGAAACCGGAGAGATTTAGAAAGGGCAGTGGCAGTGTTGCAAGAAAAGTACTTCAACAACTAGAAGCTGCAGGTTACGCTCGTCAAGTTCAAAGGGCTGGGCACAAAGGAAGGGTCATCACCCCCATTGGACAGTCCGTGTTAGACAAAGCGGCTAGTGCTTTACGCAAAAATGGATGA
PROTEIN sequence
Length: 144
MSSIYDVPANDLIAKVTEELKKNNKIKPPVWSVFAKTGVHKERPPINPEWWYVRCAAVLRKLSIRGPIGVSKLRSQYGGNKNRGMKPERFRKGSGSVARKVLQQLEAAGYARQVQRAGHKGRVITPIGQSVLDKAASALRKNG*