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rifcsphigho2_02_scaffold_37641

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_37641_1
unknown

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149..841
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37641_trna_1
unknown

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comp(1035..1107)
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_37641_2

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comp(1290..1712)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
id=5799548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60879.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_37641_3

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comp(1735..2751)
-----------------
DNA (1017bp)
protein (339aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
rifcsphigho2_02_scaffold_37641_4

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comp(3312..3782)
-----------------
DNA (471bp)
protein (157aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L31, large subunit ribosomal protein L31e {ECO:0000313|EMBL:KHO45172.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ribosomal protein L31e
rifcsphigho2_02_scaffold_37641_5

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comp(3969..4265)
-----------------
DNA (297bp)
protein (99aa)
Programmed cell death protein 5 {ECO:0000313|EMBL:KHO49879.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-binding protein
rifcsphigho2_02_scaffold_37641_6

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comp(4258..4689)
-----------------
DNA (432bp)
protein (144aa)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps19e; 30S ribosomal protein S19e
rifcsphigho2_02_scaffold_37641_7
unknown

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4832..5233
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37641_8
GWA2_OD1_47_10, Parcubacteria, Bacteria

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comp(5294..5956)
-----------------
DNA (663bp)
protein (221aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCB9_9EURY
Conserved protein Tax=GWA2_OD1_47_10
hypothetical protein
rifcsphigho2_02_scaffold_37641_9
unknown

Not on your lists

comp(6051..6251)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_02_scaffold_37641_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6416..6940)
-----------------
DNA (525bp)
protein (175aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L15e
Displaying 11 items

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