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rifcsphigho2_02_scaffold_6795

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_6795_1
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..650
-----------------
DNA (648bp)
protein (216aa)
transketolase
Related to transketolase id=2165698 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
rifcsphigho2_02_scaffold_6795_2
unknown

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comp(656..931)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_3
unknown

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comp(897..1352)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_4
unknown

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comp(1473..1775)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_5
unknown

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comp(1782..1982)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_6
unknown

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comp(1994..2821)
-----------------
DNA (828bp)
protein (276aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_7
AR19, Pacearchaeaota, DPANN, Archaea

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3090..4553
-----------------
DNA (1464bp)
protein (488aa)
ASCG--Prolyl-tRNA--synthetase
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=5240603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_6795_8
unknown

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comp(4659..7100)
-----------------
DNA (2442bp)
protein (814aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_9
unknown

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7296..7508
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(7823..8200)
-----------------
DNA (378bp)
protein (126aa)
Endoribonuclease L-PSP family protein n=1 Tax=uncultured bacterium RepID=K2AZY1_9BACT
endoribonuclease L-PSP
rifcsphigho2_02_scaffold_6795_11
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8443..9357)
-----------------
DNA (915bp)
protein (305aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZ74_METHD
hypothetical protein
rifcsphigho2_02_scaffold_6795_12
CG_Woesearch_02, Woesearchaeota, Archaea

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9465..10124
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
Proteasome subunit beta
rifcsphigho2_02_scaffold_6795_13
CG_Woesearch_01, Woesearchaeota, Archaea

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10200..12089
-----------------
DNA (1890bp)
protein (630aa)
KH-domain/beta-lactamase-domain protein id=5799852 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
kh-domain/beta-lactamase-domain-containing protein
rifcsphigho2_02_scaffold_6795_14
unknown

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12122..12841
-----------------
DNA (720bp)
protein (240aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12851..14299)
-----------------
DNA (1449bp)
protein (483aa)
Putative aspartate ammonia-lyase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LG91_9FIRM
aspartate ammonia-lyase
rifcsphigho2_02_scaffold_6795_16
unknown

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comp(14336..14833)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_17
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(15165..15818)
-----------------
DNA (654bp)
protein (218aa)
rifcsphigho2_02_scaffold_6795_18
AR11, Woesearchaeaota, DPANN, Archaea

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comp(15815..16105)
-----------------
DNA (291bp)
protein (97aa)
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_6795_19
unknown

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comp(16108..16491)
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_20
unknown

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comp(16566..16709)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_21
unknown

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comp(16830..17240)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_22
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(17345..17935)
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RGV4_METP4
hypothetical protein
rifcsphigho2_02_scaffold_6795_23
unknown

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18691..19251
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_24

Not on your lists

19464..20948
-----------------
DNA (1485bp)
protein (495aa)
ppcA; phosphoenolpyruvate carboxylase (PEPC) (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase id=5799881 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6795_25

Not on your lists

21017..23182
-----------------
DNA (2166bp)
protein (722aa)
ATP-binding protein (EC:6.3.5.4) id=5048680 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsphigho2_02_scaffold_6795_26
unknown

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23207..23734
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6795_27
unknown

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comp(23761..23946)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

Displaying 27 items

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