ggKbase home page

rifcsphigho2_02_scaffold_15521

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_15521_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2..1477
-----------------
DNA (1476bp)
protein (492aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5046338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_15521_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1467..4976
-----------------
DNA (3510bp)
protein (1170aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II large subunit; K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=5041821 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase II large subunit
rifcsphigho2_02_scaffold_15521_3
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4999..5925
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037CB1A7 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHB68545.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
hypothetical protein rbh
rifcsphigho2_02_scaffold_15521_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5922..6161)
-----------------
DNA (240bp)
protein (80aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7M9_METMS
hypothetical protein Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
rifcsphigho2_02_scaffold_15521_5

Not on your lists

comp(6428..7234)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein
Uncharacterized membrane protein id=5042271 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46769.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_15521_trna_1
unknown

Not on your lists

comp(7385..7459)
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_15521_6
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7536..8636
-----------------
DNA (1101bp)
protein (367aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J166_9BACL
lipoyl synthase
rifcsphigho2_02_scaffold_15521_7
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

8633..8902
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein
Lipoate protein ligase, C-terminal id=5095097 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP37142.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
rifcsphigho2_02_scaffold_15521_8
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

8899..9651
-----------------
DNA (753bp)
protein (251aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Euryarchaeota_31_8_curated
lipoate-protein ligase A (EC:2.7.7.63)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=5240860 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Displaying 9 items

View Taxonomy