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rifcsphigho2_02_scaffold_15872

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_15872_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..476
-----------------
DNA (474bp)
protein (158aa)
beta-lactamase superfamily hydrolase Tax=CG_Woesearch_02
hypothetical protein
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_15872_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(444..1400)
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_15872_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1580..2032
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799933 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_15872_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2066..3193
-----------------
DNA (1128bp)
protein (376aa)
trpS; tryptophan--tRNA ligase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase Tax=CG_Woesearch_02
Tryptophan--tRNA ligase id=3672836 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_15872_5
AR15, Woesearchaeaota, DPANN, Archaea

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3239..3460
-----------------
DNA (222bp)
protein (74aa)
transmembrane_regions Tax=AR15
transmembrane_regions id=5799942 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_15872_6
unknown

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3457..4317
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15872_7

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comp(4468..5787)
-----------------
DNA (1320bp)
protein (440aa)
Marine sediment metagenome DNA, contig: S01H1_L04350 {ECO:0000313|EMBL:GAF84016.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative nucleotidyltransferase id=5799944 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_15872_8
CG_Woesearch_02, Woesearchaeota, Archaea

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6211..7224
-----------------
DNA (1014bp)
protein (338aa)
peptidil-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=CG_Woesearch_02
peptidyl-prolyl cis-trans isomerase C (EC:5.2.1.8)
peptidil-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=5240999 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_15872_9
unknown

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7299..8078
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15872_10
unknown

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8192..9484
-----------------
DNA (1293bp)
protein (431aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15872_11
unknown

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comp(9481..9546)
-----------------
DNA (66bp)
protein (22aa)

This feature has no annotations

Displaying 11 items

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