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rifcsphigho2_02_scaffold_5144

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5144_1
unknown

Not on your lists

1..237
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5144_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

535..1170
-----------------
DNA (636bp)
protein (212aa)
seg id=5041693 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_5144_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

1194..1703
-----------------
DNA (510bp)
protein (170aa)
id=5041692 Tax=CG_Woesearch_03
id=5041692 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5144_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

1707..2207
-----------------
DNA (501bp)
protein (167aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_5144_trna_2
unknown

Not on your lists

comp(2335..2407)
-----------------
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_5144_5
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

2509..2985
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein
id=5048266 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=GWC2_CPR2_39_10
rifcsphigho2_02_scaffold_5144_6
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

2982..3608
-----------------
DNA (627bp)
protein (209aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDW3_DICT6
rifcsphigho2_02_scaffold_5144_7

Not on your lists

comp(3598..4590)
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO47933.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_5144_trna_1
unknown

Not on your lists

4626..4699
-----------------
DNA (74bp)
transferRNA
rifcsphigho2_02_scaffold_5144_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4706..5734
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein id=99465 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsphigho2_02_scaffold_5144_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

5731..6834
-----------------
DNA (1104bp)
protein (368aa)
hypothetical protein
id=5041678 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_5144_10

Not on your lists

6871..7659
-----------------
DNA (789bp)
protein (263aa)
alpha/beta hydrolase id=5042280 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Alpha/beta hydrolase {ECO:0000313|EMBL:KHO46778.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5144_11
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

7656..8348
-----------------
DNA (693bp)
protein (231aa)
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKS84947.1}; TaxID=1618436 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_43_11.;"
Glycosyl transferase family 2 id=3262129 bin=GWF2_Ignavibacteria_33_9 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Glycosyl transferase family 2
rifcsphigho2_02_scaffold_5144_12
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

8345..9379
-----------------
DNA (1035bp)
protein (345aa)
Glycosyl transferase family 2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY86_METFV
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP77268.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanother
rifcsphigho2_02_scaffold_5144_13

Not on your lists

9376..10014
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50790.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_5144_14
bacterium UASB270, Bacteria

Not on your lists

10049..11164
-----------------
DNA (1116bp)
protein (372aa)
cyclopropane fatty acyl phospholipid synthase n=1 Tax=gamma proteobacterium SCGC AAA001-B15 RepID=UPI0002485AE2
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:GAK60282.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Methyltransferase, cyclopropane fatty acid synthase
rifcsphigho2_02_scaffold_5144_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11161..12585)
-----------------
DNA (1425bp)
protein (475aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] Tax=CG_Woesearch_02
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5041669 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_02_scaffold_5144_16

Not on your lists

12781..13923
-----------------
DNA (1143bp)
protein (381aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; TaxID=77133 species="Bacteria;
Glucose-6-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2FF78_9BACT
phosphoglucose isomerase
rifcsphigho2_02_scaffold_5144_17
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14122..14403
-----------------
DNA (282bp)
protein (94aa)
UPI0003D1AAE5 related cluster n=1 Tax=unknown RepID=UPI0003D1AAE5
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1090322 species="Archae
deoxyribonuclease
rifcsphigho2_02_scaffold_5144_18
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14407..15213)
-----------------
DNA (807bp)
protein (269aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ru
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7ALP5_9FIRM
ribulose-phosphate 3-epimerase
rifcsphigho2_02_scaffold_5144_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15466..16785)
-----------------
DNA (1320bp)
protein (440aa)
glutamyl-tRNA(Gln) amidotransferase, subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Woesearch_02
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_02_scaffold_5144_20
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16840..17382)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003609C27
HEPN domain protein {ECO:0000313|EMBL:EHQ34453.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limico
hypothetical protein
rifcsphigho2_02_scaffold_5144_21

Not on your lists

comp(17327..17875)
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360DDAD
Uncharacterized protein {ECO:0000313|EMBL:KHO45073.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5144_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17919..18827)
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC/Lrp family transcriptional regulator id=5049211 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_02_scaffold_5144_23
unknown

Not on your lists

18971..19501
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5144_24
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19633..20205
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C97DE
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5144_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

20207..20992
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein id=5048336 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsphigho2_02_scaffold_5144_26
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21044..23326)
-----------------
DNA (2283bp)
protein (761aa)
AAA family ATPase, CDC48 subfamily Tax=AR15
AAA family ATPase, CDC48 subfamily id=5799990 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily
rifcsphigho2_02_scaffold_5144_27
unknown

Not on your lists

comp(23422..24132)
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5144_28
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(24220..24801)
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Displaying items 1-30 of 38 in total

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