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rifcsphigho2_02_scaffold_3038

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3038_1
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

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2..601
-----------------
DNA (600bp)
protein (200aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:AKG52949.1}; EC=4.2.3.4 {ECO:0000313|EMBL:AKG52949.1};; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenim
3-dehydroquinate synthase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BGQ0_DEHSV
3-dehydroquinate synthase
rifcsphigho2_02_scaffold_3038_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(749..1483)
-----------------
DNA (735bp)
protein (245aa)
glucose-1-phosphate thymidylyl transferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyl transferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHD8_THEPS
nucleotidyltransferase Tax=AR9
rifcsphigho2_02_scaffold_3038_3
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(1509..2279)
-----------------
DNA (771bp)
protein (257aa)
Methyltransferase Tax=GWA1_OD1_36_12
methyltransferase type 11 id=13621 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_3038_4
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2445..3470)
-----------------
DNA (1026bp)
protein (342aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
group 1 glycosyl transferase id=5096634 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_3038_5
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(3467..4579)
-----------------
DNA (1113bp)
protein (371aa)
Glycosyltransferase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BAP7_9EURY
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGK60063.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus
rifcsphigho2_02_scaffold_3038_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4576..4950)
-----------------
DNA (375bp)
protein (125aa)
seg id=5800193 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsphigho2_02_scaffold_3038_7
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(4928..6340)
-----------------
DNA (1413bp)
protein (471aa)
UTP--glucose-1-phosphate uridylyltransferase; K00972 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
UDP-N-acetylhexosamine pyrophosphorylase id=2844460 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
UTP--glucose-1-phosphate uridylyltransferase
rifcsphigho2_02_scaffold_3038_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6774..6977)
-----------------
DNA (204bp)
protein (68aa)
id=5050200 Tax=CG_Woesearch_02
id=5050200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_3038_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(7111..8229)
-----------------
DNA (1119bp)
protein (373aa)
Fibronectin-binding A domain protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR00_METIM
fibronectin-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
Fibronectin-binding A domain protein
rifcsphigho2_02_scaffold_3038_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8499..10259)
-----------------
DNA (1761bp)
protein (587aa)
ABC transporter; K09686 antibiotic transport system permease protein id=5041890 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter; K09686 antibiotic transport system permease protein Tax=AR4
ABC-2 type transporter
rifcsphigho2_02_scaffold_3038_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10256..11368)
-----------------
DNA (1113bp)
protein (371aa)
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein id=5041889 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=AR4
ABC-type multidrug transport system, ATP-ase compoment
rifcsphigho2_02_scaffold_3038_12
unknown

Not on your lists

comp(11440..12645)
-----------------
DNA (1206bp)
protein (402aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3038_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12762..13199
-----------------
DNA (438bp)
protein (146aa)
Transcriptional regulator, XRE family n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TCP5_METSL
helix-turn-helix domain-containing protein; K03627 putative transcription factor Tax=CG_Woesearch_02
XRE family transcriptional regulator
rifcsphigho2_02_scaffold_3038_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13340..14728)
-----------------
DNA (1389bp)
protein (463aa)
hypothetical protein id=5041885 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
rifcsphigho2_02_scaffold_3038_15
unknown

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comp(14725..15243)
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3038_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(15614..16834)
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY id=5103319 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_3038_17
unknown

Not on your lists

comp(16818..17453)
-----------------
DNA (636bp)
protein (212aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY id=5103319 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_3038_18
unknown

Not on your lists

comp(17455..18693)
-----------------
DNA (1239bp)
protein (413aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY Tax=AR20
Glycosyltransferase involved in cell wall biogenesis
rifcsphigho2_02_scaffold_3038_19

Not on your lists

comp(18690..20120)
-----------------
DNA (1431bp)
protein (477aa)
hypothetical protein
id=5050180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44961.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_3038_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20117..21619)
-----------------
DNA (1503bp)
protein (501aa)
hypothetical protein
Uncharacterized protein Tax=CG_Woesearch_02
Uncharacterized protein id=5050179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_3038_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

21912..22640
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003695CE9
clavaldehyde dehydrogenase Tax=AR17
clavaldehyde dehydrogenase
rifcsphigho2_02_scaffold_3038_22
unknown

Not on your lists

comp(22684..23040)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3038_23

Not on your lists

23382..23666
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45951.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_3038_24

Not on your lists

23692..24771
-----------------
DNA (1080bp)
protein (360aa)
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5048364 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA repair and recombination protein RadA
rifcsphigho2_02_scaffold_3038_25

Not on your lists

24880..25296
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50794.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
deoxyribonuclease/rho motif-like TRAM protein id=5048366 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_3038_26
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


25496..26140
-----------------
DNA (645bp)
protein (215aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78533.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
rifcsphigho2_02_scaffold_3038_27

Not on your lists

comp(26142..26831)
-----------------
DNA (690bp)
protein (230aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA repair and recombination protein RadB
rifcsphigho2_02_scaffold_3038_28

Not on your lists

27085..28029
-----------------
DNA (945bp)
protein (315aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50789.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Replication factor-A C terminal domain, OB-fold nucleic acid binding domain family protein id=5800282 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsphigho2_02_scaffold_3038_29
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(28026..28607)
-----------------
DNA (582bp)
protein (194aa)
Hypothetical conserved protein {ECO:0000313|EMBL:BAC14447.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus iheyensis (strain D
rifcsphigho2_02_scaffold_3038_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

28746..29192
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8EEE
hypothetical protein; K07038 inner membrane protein Tax=AR18
membrane-bound metal-dependent hydrolase
Displaying items 1-30 of 44 in total

View Taxonomy