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rifcsphigho2_02_scaffold_3792

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3792_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

42..608
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein
coiled-coil id=5043755 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
coiled-coil Tax=AR4
rifcsphigho2_02_scaffold_3792_2

Not on your lists

833..1495
-----------------
DNA (663bp)
protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51138.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5043754 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_3792_3

Not on your lists

comp(1502..2071)
-----------------
DNA (570bp)
protein (190aa)
seg id=5043752 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47068.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_3792_4

Not on your lists

comp(2080..2676)
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50645.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
seg id=5043751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_3792_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3114..3692)
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein
seg id=5043750 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_02_scaffold_3792_6

Not on your lists

3847..4413
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54116.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
haloacid dehalogenase superfamily protein
rifcsphigho2_02_scaffold_3792_7
unknown

Not on your lists

4410..4550
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_8

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4641..5204
-----------------
DNA (564bp)
protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL93349.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=18248014 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_3792_9
unknown

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5450..6124
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_10
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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6133..6771
-----------------
DNA (639bp)
protein (213aa)
HAD-superfamily hydrolase Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
Putative Beta-phosphoglucomutase id=1969952 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
haloacid dehalogenase-like hydrolase, putative
rifcsphigho2_02_scaffold_3792_11
unknown

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comp(6764..7219)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


7288..9027
-----------------
DNA (1740bp)
protein (580aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=AR11
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BGM7_THEXL
rifcsphigho2_02_scaffold_3792_13
unknown

Not on your lists

9211..9474
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9476..10576)
-----------------
DNA (1101bp)
protein (367aa)
tRNA-guanine transglycosylase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_Woesearch_02
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5048255 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
rifcsphigho2_02_scaffold_3792_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10702..12327
-----------------
DNA (1626bp)
protein (542aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=AR17
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsphigho2_02_scaffold_3792_16

Not on your lists

12637..12879
-----------------
DNA (243bp)
protein (81aa)
UPF0235 protein MSWAN_0547 id=5799721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61052.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_3792_17

Not on your lists

comp(12866..13630)
-----------------
DNA (765bp)
protein (255aa)
transcriptional regulator TrmB id=5047425 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45243.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_3792_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

13668..14789
-----------------
DNA (1122bp)
protein (374aa)
Metal dependent phosphohydrolase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1Q5_ROSS1
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_3792_19
unknown

Not on your lists

14916..15176
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

15155..15397
-----------------
DNA (243bp)
protein (81aa)
Tax=AR9
rifcsphigho2_02_scaffold_3792_21
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

15399..15611
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein
Protein of unknown function DUF2283 Tax=CG_Pacearch_04
Protein of unknown function DUF2283 id=5241464 bin=GW2011_AR10_complete species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_3792_22
unknown

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15875..16237
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_23
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16295..16798)
-----------------
DNA (504bp)
protein (168aa)
transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=AR13
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5047515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator
rifcsphigho2_02_scaffold_3792_24
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

16894..18111
-----------------
DNA (1218bp)
protein (406aa)
Histone deacetylase superfamily id=4705374 bin=GWC2_OP3_44_8 species=Methanotorris igneus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EGD72726.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818
deacetylase
rifcsphigho2_02_scaffold_3792_25
unknown

Not on your lists

18084..18497
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_26
unknown

Not on your lists

18503..19351
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3792_27
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(19348..19704)
-----------------
DNA (357bp)
protein (119aa)
id=5799837 Tax=GWA2_WOR_2_47_8_curated
id=5799837 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3792_28
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19726..20643)
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI000382B258
Integral membrane protein DUF6 {ECO:0000313|EMBL:EDX85961.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
hypothetical protein
rifcsphigho2_02_scaffold_3792_29

Not on your lists

comp(20693..21433)
-----------------
DNA (741bp)
protein (247aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX6_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97912.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Hypothetical protein
rifcsphigho2_02_scaffold_3792_30
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(21587..22372)
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein Tax=CG_Woesearch_01
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcriptional regulator
Displaying items 1-30 of 62 in total

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