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rifcsphigho2_02_scaffold_14089

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_14089_1

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comp(3..935)
-----------------
DNA (933bp)
protein (311aa)
Marine sediment metagenome DNA, contig: S03H2_L03654 {ECO:0000313|EMBL:GAH44446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_14089_2

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comp(1018..1986)
-----------------
DNA (969bp)
protein (323aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=5049194 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
magnesium and cobalt transporter protein
rifcsphigho2_02_scaffold_14089_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2306..4162)
-----------------
DNA (1857bp)
protein (619aa)
DNA repair helicase rad3 Tax=CG_Woesearch_02
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
rifcsphigho2_02_scaffold_14089_4
AR4, Woesearchaeaota, DPANN, Archaea

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4304..4576
-----------------
DNA (273bp)
protein (91aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein MarR Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_14089_5

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comp(4703..5158)
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rps15p; 30S ribosomal protein S15P
rifcsphigho2_02_scaffold_14089_6
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(5502..6440)
-----------------
DNA (939bp)
protein (313aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
phoU; transcriptional regulator Tax=GWA2_WOR_2_47_8_curated
SpoVT/AbrB protein
rifcsphigho2_02_scaffold_14089_7
Thermoproteus sp. AZ2, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6643..7062)
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000362D5DC
Diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000313|EMBL:KJR73561.1}; TaxID=1609232 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteu
NUDIX hydrolase
rifcsphigho2_02_scaffold_14089_8
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7049..8257)
-----------------
DNA (1209bp)
protein (403aa)
Major facilitator superfamily permease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKR0_IGNAJ
Major facilitator superfamily permease; K06902 MFS transporter, UMF1 family Tax=CG_Ignavi_02
Major facilitator superfamily permease
rifcsphigho2_02_scaffold_14089_9
AR11, Woesearchaeaota, DPANN, Archaea

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8539..9654
-----------------
DNA (1116bp)
protein (372aa)
N(2),N(2)-dimethylguanosine tRNA methyltransferase; K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=AR11
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA (guanine-N2)-dimethyltransferase
rifcsphigho2_02_scaffold_14089_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9646..9921)
-----------------
DNA (276bp)
protein (92aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=CG_Woesearch_02
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta
rifcsphigho2_02_scaffold_14089_11
Oryctolagus cuniculus, Oryctolagus, Lagomorpha, Mammalia, Chordata, Metazoa

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10396..13329
-----------------
DNA (2934bp)
protein (978aa)
Trichohyalin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FHD4_TRIVA
Trichohyalin; TaxID=9986 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.;" source="Oryctola
hypothetical protein
rifcsphigho2_02_scaffold_14089_12
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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13386..13778
-----------------
DNA (393bp)
protein (131aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28795_ARCFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAB89771.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
Displaying 12 items

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