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rifcsphigho2_02_scaffold_9738

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9738_1
CG_Woesearch_02, Woesearchaeota, Archaea

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1001..1921
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein Tax=CG_Woesearch_02
condensin subunit ScpA; K05896 segregation and condensation protein A id=5048743 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Chromosome segregation and condensation protein ScpA
rifcsphigho2_02_scaffold_9738_2
unknown

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comp(1934..2773)
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_3
unknown

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2850..3965
-----------------
DNA (1116bp)
protein (372aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_4
CG_Woesearch_02, Woesearchaeota, Archaea

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4056..4478
-----------------
DNA (423bp)
protein (141aa)
prefoldin, archaeal alpha subunit/eukaryotic subunit 5 Tax=CG_Woesearch_02
pfdA; prefoldin subunit alpha; K04797 prefoldin alpha subunit id=18313428 bin=Nanosalina tax=Nanosalina
GIM5; prefoldin subunit alpha
rifcsphigho2_02_scaffold_9738_5
CG_Woesearch_02, Woesearchaeota, Archaea

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4490..6310
-----------------
DNA (1821bp)
protein (607aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=CG_Woesearch_02
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5048740 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Signal recognition particle GTPase
rifcsphigho2_02_scaffold_9738_6
unknown

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6637..7317
-----------------
DNA (681bp)
protein (227aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_7
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(7460..8125)
-----------------
DNA (666bp)
protein (222aa)
ski2-like helicase; K03726 helicase [EC:3.6.4.-] Tax=CG_Woesearch_01
Putative ski2-type helicase id=5800569 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ski2-like helicase
rifcsphigho2_02_scaffold_9738_8
unknown

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comp(8161..8328)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(8524..9090)
-----------------
DNA (567bp)
protein (189aa)
id=5045280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR11
rifcsphigho2_02_scaffold_9738_10
unknown

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9469..9816
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_11
unknown

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comp(9818..10861)
-----------------
DNA (1044bp)
protein (348aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_12
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10815..12626)
-----------------
DNA (1812bp)
protein (604aa)
Hypothetical helicase n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0REQ3_PAEP6
ATP-dependent helicase {ECO:0000313|EMBL:KEO80724.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymyx
helicase
rifcsphigho2_02_scaffold_9738_13
unknown

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comp(12977..14743)
-----------------
DNA (1767bp)
protein (589aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_14
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(14793..15965)
-----------------
DNA (1173bp)
protein (391aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5240748 bin=GW2011_AR10_complete species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S-adenosylmethionine synthetase (EC:2.5.1.6)
rifcsphigho2_02_scaffold_9738_15
CG_Pacearch_04, Pacearchaeota, Archaea

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16179..16721
-----------------
DNA (543bp)
protein (181aa)
Tax=CG_Pacearch_04
rifcsphigho2_02_scaffold_9738_16

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17072..17824
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50161.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
GTP-binding protein YlqF; K06948 id=5047469 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
GTP-binding protein YlqF
rifcsphigho2_02_scaffold_9738_17
unknown

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17821..18117
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_18
unknown

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comp(18319..18780)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9738_19

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18862..19377
-----------------
DNA (516bp)
protein (172aa)
Marine sediment metagenome DNA, contig: S01H1_S34811 {ECO:0000313|EMBL:GAG34603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcription regulator, containing CBS protein
rifcsphigho2_02_scaffold_9738_20
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(19796..20329)
-----------------
DNA (534bp)
protein (178aa)
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=CG_Woesearch_01
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl10e; 50S ribosomal protein L10e
rifcsphigho2_02_scaffold_9738_21
unknown

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20940..21680
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

Displaying 21 items

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