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rifcsphigho2_02_scaffold_2185

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2185_1
Hyalomma marginatum, Hyalomma, Ixodida, Acari, Arthropoda, Metazoa

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189..533
-----------------
DNA (345bp)
protein (115aa)
Hypothetical glycine rich secreted protein (Fragment) n=1 Tax=Hyalomma marginatum rufipes RepID=E2J6U9_9ACAR
Hypothetical glycine rich secreted protein {ECO:0000313|EMBL:ADN23537.1}; Flags: Fragment;; TaxID=72862 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiforme
rifcsphigho2_02_scaffold_2185_2
unknown

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646..1242
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_3

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comp(1436..1741)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49659.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Putative uncharacterized protein id=4961697 bin=GWC2_Nitrospirae-rel_56_14 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative membrane protein
rifcsphigho2_02_scaffold_2185_4
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

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comp(2000..2200)
-----------------
DNA (201bp)
protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_2185_5
AR9, Woesearchaeaota, DPANN, Archaea

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comp(2232..2816)
-----------------
DNA (585bp)
protein (195aa)
PROKAR_LIPOPROTEIN id=5800408 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
rifcsphigho2_02_scaffold_2185_6
unknown

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comp(2797..3033)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_7
unknown

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comp(3155..3559)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9A1D4_9BACI id=5103500 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9A1D4_9BACI Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_2185_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3566..5737)
-----------------
DNA (2172bp)
protein (724aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RBG_13_Pacearchaeota_36_9_curated
Copper-translocating P-type ATPase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFH8_METPE
copper-translocating P-type ATPase
rifcsphigho2_02_scaffold_2185_9
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(5737..6450)
-----------------
DNA (714bp)
protein (238aa)
Heavy metal transport/detoxification protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFH9_METPE id=5103501 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:KKW02432.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Heavy metal transport/detoxification protein
rifcsphigho2_02_scaffold_2185_10
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(6461..6664)
-----------------
DNA (204bp)
protein (68aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ETS5_9BACT
heavy metal transport/detoxification protein
rifcsphigho2_02_scaffold_2185_11
AR4, Woesearchaeaota, DPANN, Archaea

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6830..7372
-----------------
DNA (543bp)
protein (181aa)
MarR family transcriptional regulator id=5041916 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
MarR family transcriptional regulator Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_2185_12
unknown

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comp(7580..7819)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_13
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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comp(7890..8927)
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein id=24608239 bin=RAAC11 species=Anopheles darlingi genus=Anopheles taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=RAAC11 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KJE92449.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
hypothetical protein
rifcsphigho2_02_scaffold_2185_14

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comp(9319..9798)
-----------------
DNA (480bp)
protein (160aa)
Putative secreted peptidase n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WNI2_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:KKL97448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative secreted peptidase
rifcsphigho2_02_scaffold_2185_15
AR15, Woesearchaeaota, DPANN, Archaea

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comp(10065..10583)
-----------------
DNA (519bp)
protein (173aa)
"Winged helix" DNA-binding domain id=5800401 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
"Winged helix" DNA-binding domain Tax=AR15
putative membrane-associated transcriptional regulator
rifcsphigho2_02_scaffold_2185_16

Not on your lists

10693..11409
-----------------
DNA (717bp)
protein (239aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO50907.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DSBA oxidoreductase
rifcsphigho2_02_scaffold_2185_17
unknown

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comp(11577..11945)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_18
unknown

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12109..12420
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_19
GWA1_OD1_44_29, Giovannonibacteria, Parcubacteria, Bacteria

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12882..14519
-----------------
DNA (1638bp)
protein (546aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BSW8_9BACT
Multicopper oxidase family protein {ECO:0000313|EMBL:KKT61984.1}; TaxID=1618646 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_29.;"
Multicopper oxidase type 3 rbh
rifcsphigho2_02_scaffold_2185_20
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(14516..15208)
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034CF3F3
oxidoreductase Tax=CG_Pacearch_06
short-chain dehydrogenase/reductase SDR
rifcsphigho2_02_scaffold_2185_trna_2
unknown

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comp(15217..15323)
-----------------
DNA (107bp)
transferRNA
rifcsphigho2_02_scaffold_2185_trna_1
unknown

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15581..15651
-----------------
DNA (71bp)
transferRNA
rifcsphigho2_02_scaffold_2185_21
R_RIF_OD1_03_53_11, RIF-OD1-3, Parcubacteria, Bacteria

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15656..16357
-----------------
DNA (702bp)
protein (234aa)
sugar-phosphate nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_53_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K091_9FIRM
rifcsphigho2_02_scaffold_2185_22
CG_Woesearch_02, Woesearchaeota, Archaea

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16342..17106
-----------------
DNA (765bp)
protein (255aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=CG_Woesearch_02
methyltransferase (EC:2.1.1.-); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5047417 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
tRNA (adenine-n(1)-)-methyltransferase
rifcsphigho2_02_scaffold_2185_23

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comp(17112..17870)
-----------------
DNA (759bp)
protein (253aa)
transcriptional regulator TrmB id=5044016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO46859.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
rifcsphigho2_02_scaffold_2185_24
unknown

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17948..18682
-----------------
DNA (735bp)
protein (245aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_25
unknown

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18763..19269
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2185_26
GWF1_OD1_36_78, Moranbacteria, Parcubacteria, Bacteria

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19270..20343
-----------------
DNA (1074bp)
protein (358aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=7984 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Pyruvate phosphate dikinase, PEP/pyruvate-binding domain protein {ECO:0000313|EMBL:KKQ13569.1}; TaxID=1618718 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011
pyruvate, water dikinase
rifcsphigho2_02_scaffold_2185_27

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20372..20965
-----------------
DNA (594bp)
protein (198aa)
Heat shock protein DnaJ-like protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M9K9_9EURY
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:KHO49841.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
heat shock protein DnaJ-like protein
rifcsphigho2_02_scaffold_2185_28
unknown

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comp(20989..21258)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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