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rifcsphigho2_02_scaffold_2313

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2313_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2..1642
-----------------
DNA (1641bp)
protein (547aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368F066
RNA-directed DNA polymerase Tax=RBG_13_Pacearchaeota_36_9_curated
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_02_scaffold_2313_2
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(1639..2181)
-----------------
DNA (543bp)
protein (181aa)
Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_2313_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2437..3210)
-----------------
DNA (774bp)
protein (258aa)
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RNA-binding protein snRNP-like protein Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_2313_4
unknown

Not on your lists

3289..3939
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_5

Not on your lists

comp(4421..5452)
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WYT6_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:KKL64929.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_2313_6
unknown

Not on your lists

comp(5525..6991)
-----------------
DNA (1467bp)
protein (489aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6991..7476)
-----------------
DNA (486bp)
protein (162aa)
seg Tax=CG_Woesearch_02
seg id=5043684 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2313_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7881..8849
-----------------
DNA (969bp)
protein (323aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Woesearch_01
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5043943 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
histidine triad (HIT) protein
rifcsphigho2_02_scaffold_2313_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

8839..9366
-----------------
DNA (528bp)
protein (176aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Tax=CG_Woesearch_01
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=5045850 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
rifcsphigho2_02_scaffold_2313_10
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

9696..11147
-----------------
DNA (1452bp)
protein (484aa)
Putative uncharacterized protein Tax=CG_Woesearch_03
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2313_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11147..11833
-----------------
DNA (687bp)
protein (229aa)
Zinc finger protein 318 n=1 Tax=Tupaia chinensis RepID=L9KU86_TUPCH
hypothetical protein
Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_2313_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

12293..14437
-----------------
DNA (2145bp)
protein (715aa)
Xylose isomerase-like, TIM barrel domain Tax=CG_Woesearch_03
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2313_13
unknown

Not on your lists

comp(14526..15170)
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15282..16103
-----------------
DNA (822bp)
protein (274aa)
DNA polymerase beta domain protein region Tax=CG_Woesearch_02
DNA polymerase beta domain protein region id=5046032 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta protein
rifcsphigho2_02_scaffold_2313_15
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(16317..17579)
-----------------
DNA (1263bp)
protein (421aa)
PKD domain containing protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIJ2_DESAA
PKD domain-containing protein Tax=RBG_13_RIF03_48_7_curated
PKD domain-containing protein
rifcsphigho2_02_scaffold_2313_16
unknown

Not on your lists

comp(17576..18766)
-----------------
DNA (1191bp)
protein (397aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_17
unknown

Not on your lists

comp(18874..20178)
-----------------
DNA (1305bp)
protein (435aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_18
unknown

Not on your lists

comp(20223..21653)
-----------------
DNA (1431bp)
protein (477aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_19
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(22195..22839)
-----------------
DNA (645bp)
protein (215aa)
Probable tesA-like protease n=1 Tax=Moritella sp. PE36 RepID=A6FGK7_9GAMM id=67407 bin=ACD48 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_13_RIF_OD1_08_41_18_curated
putative lipolytic enzyme, G-D-S-L
rifcsphigho2_02_scaffold_2313_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(22906..23763)
-----------------
DNA (858bp)
protein (286aa)
type IV leader peptidase family protein Tax=CG_Woesearch_02
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
rifcsphigho2_02_scaffold_2313_21
unknown

Not on your lists

comp(23826..24011)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2313_22
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

24138..25460
-----------------
DNA (1323bp)
protein (441aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
WD40 domain-containing protein; K03641 TolB protein Tax=RBG_16_Chloroflexi_48_7_curated
WD40 domain-containing protein
rifcsphigho2_02_scaffold_2313_23
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25469..27847)
-----------------
DNA (2379bp)
protein (793aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036A6291
WD40-like protein Beta Propeller Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
rifcsphigho2_02_scaffold_2313_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


28131..28508
-----------------
DNA (378bp)
protein (126aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=AR4
50S ribosomal protein L7Ae
rifcsphigho2_02_scaffold_2313_25

Not on your lists


28511..28798
-----------------
DNA (288bp)
protein (96aa)
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
30S ribosomal protein S28e
rifcsphigho2_02_scaffold_2313_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


28798..28998
-----------------
DNA (201bp)
protein (67aa)
rpl24E; 50S ribosomal protein L24E; K02896 large subunit ribosomal protein L24e Tax=CG_Woesearch_02
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
large subunit ribosomal protein L24e
rifcsphigho2_02_scaffold_2313_27
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

28995..29468
-----------------
DNA (474bp)
protein (158aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=53687 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ndk; nucleoside diphosphate kinase
rifcsphigho2_02_scaffold_2313_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

29474..30535
-----------------
DNA (1062bp)
protein (354aa)
FusA; elongation factor EF-2; K03234 elongation factor 2 id=5051527 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
FusA; elongation factor EF-2; K03234 elongation factor 2 Tax=AR18
FusA; elongation factor EF-2
rifcsphigho2_02_scaffold_2313_29

Not on your lists

30549..33182
-----------------
DNA (2634bp)
protein (878aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
FusA; elongation factor EF-2
rifcsphigho2_02_scaffold_2313_30
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(33237..33665)
-----------------
DNA (429bp)
protein (143aa)
Endoribonuclease l-psp n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FBJ1_9PSED
hypothetical protein; K07567 TdcF protein Tax=RBG_13_Woesearchaeota_36_6_curated
endoribonuclease L-PSP
Displaying items 1-30 of 33 in total

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