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rifcsphigho2_02_scaffold_2451

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2451_1
AR4, Woesearchaeaota, DPANN, Archaea

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154..1071
-----------------
DNA (918bp)
protein (306aa)
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=5041685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=AR4
daunorubicin resistance ATP-binding protein
rifcsphigho2_02_scaffold_2451_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

1068..1853
-----------------
DNA (786bp)
protein (262aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein id=5041686 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=AR4
putative ABC transporter ATP-binding and permease
rifcsphigho2_02_scaffold_2451_3
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(1836..2384)
-----------------
DNA (549bp)
protein (183aa)
Methyladenine glycosylase n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3UXG4_9LEPT
Methyladenine glycosylase {ECO:0000313|EMBL:EPG73948.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str.
DNA-3-methyladenine glycosylase
rifcsphigho2_02_scaffold_2451_4
Parcubacteria bacterium GW2011_GWB1_52_7, Parcubacteria, Bacteria

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comp(2388..3134)
-----------------
DNA (747bp)
protein (249aa)
Polymerase sliding clamp protein {ECO:0000313|EMBL:KKW29271.1}; TaxID=1618885 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_52_7.;"
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
rifcsphigho2_02_scaffold_2451_5
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3225..4559)
-----------------
DNA (1335bp)
protein (445aa)
Predicted hydrolase Tax=AR11
Beta-lactamase domain protein id=5800253 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_02_scaffold_2451_6
Arthroderma otae, Arthroderma, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

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comp(4581..5546)
-----------------
DNA (966bp)
protein (322aa)
Putative uncharacterized protein n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) RepID=C5FBF8_ARTOC
Putative uncharacterized protein {ECO:0000313|EMBL:EEQ27142.1}; TaxID=554155 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermata
rifcsphigho2_02_scaffold_2451_7

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comp(5976..6371)
-----------------
DNA (396bp)
protein (132aa)
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46068.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_2451_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6372..6599)
-----------------
DNA (228bp)
protein (76aa)
id=5046266 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2451_9

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comp(6599..7177)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50398.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_2451_10
R_OD1_Kaiserbacteria_55_20, Kaiserbacteria, Parcubacteria, Bacteria

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7582..8712
-----------------
DNA (1131bp)
protein (377aa)
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_20_curated
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
carbamoyl-phosphate synthase [ammonia], putative id=5041867 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2451_11

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8705..11902
-----------------
DNA (3198bp)
protein (1066aa)
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=5046262 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KHO46063.1}; EC=6.3.5.5 {ECO:0000313|EMBL:KHO46063.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
rifcsphigho2_02_scaffold_2451_12
unknown

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11985..12485
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2451_13
CG_Woesearch_03, Woesearchaeota, Archaea

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12538..13146
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein Tax=CG_Woesearch_03
Putative uncharacterized protein id=5048378 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2451_14
AR11, Woesearchaeaota, DPANN, Archaea

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13143..14330
-----------------
DNA (1188bp)
protein (396aa)
Chromosome segregation and condensation protein, ScpB Tax=AR11
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Segregation and condensation protein B
rifcsphigho2_02_scaffold_2451_15

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14603..15820
-----------------
DNA (1218bp)
protein (406aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydroorotase
rifcsphigho2_02_scaffold_2451_16

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15840..16727
-----------------
DNA (888bp)
protein (296aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1579374 species="Ar
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A1L6_THESM
rifcsphigho2_02_scaffold_2451_17

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16724..17164
-----------------
DNA (441bp)
protein (147aa)
Aspartate carbamoyltransferase regulatory chain id=4493024 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Uncharacterized protein {ECO:0000313|EMBL:KKM86492.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aspartate carbamoyltransferase regulatory subunit
rifcsphigho2_02_scaffold_2451_18
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

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17161..18291
-----------------
DNA (1131bp)
protein (377aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) id=5799618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2451_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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18671..21166
-----------------
DNA (2496bp)
protein (832aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_13_Woesearchaeota_36_6_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A id=5800238 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2451_20

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21105..22283
-----------------
DNA (1179bp)
protein (393aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5048385 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45057.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_2451_21
AR15, Woesearchaeaota, DPANN, Archaea

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comp(22296..22889)
-----------------
DNA (594bp)
protein (198aa)
udk; uridine kinase Udk (EC:2.7.1.48)
Uridine kinase id=5799569 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uridine kinase Tax=AR15
rifcsphigho2_02_scaffold_2451_22

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23501..23680
-----------------
DNA (180bp)
protein (60aa)
Preprotein translocase Sec, Sec61-beta subunit id=5799959 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61290.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2451_23

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23689..24027
-----------------
DNA (339bp)
protein (113aa)
Nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha id=5048387 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
alpha-NAC-related protein
rifcsphigho2_02_scaffold_2451_24
unknown

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24024..24368
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2451_25
CG_Woesearch_03, Woesearchaeota, Archaea

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24361..24810
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein
id=5103666 Tax=CG_Woesearch_03
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_2451_26

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24807..25535
-----------------
DNA (729bp)
protein (243aa)
Cell division ATPase MinD, archaeal id=5800195 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
cell division inhibitor
rifcsphigho2_02_scaffold_2451_27
CG_Woesearch_03, Woesearchaeota, Archaea

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25519..26055
-----------------
DNA (537bp)
protein (179aa)
id=5048391 Tax=CG_Woesearch_03
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2451_28

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comp(26283..26888)
-----------------
DNA (606bp)
protein (202aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Oceanimonas smirnovii RepID=UPI00037A3E6D
putative glycerol-3-phosphate acyltransferase PlsY
Marine sediment metagenome DNA, contig: S12H4_S07545 {ECO:0000313|EMBL:GAI93688.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_2451_trna_1
unknown

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26317..26388
-----------------
DNA (72bp)
transferRNA
Displaying 29 items

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