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rifcsphigho2_02_scaffold_2519

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2519_1
unknown

Not on your lists

3..1244
-----------------
DNA (1242bp)
protein (414aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2519_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1859..7333
-----------------
DNA (5475bp)
protein (1825aa)
hypothetical protein Tax=AR11
hypothetical protein id=5041855 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2519_3
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

7392..8186
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L271_SAPGL
hypothetical protein; K06966 Tax=GWA1_OD1_49_17_curated
hypothetical protein
rifcsphigho2_02_scaffold_2519_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

8208..8705
-----------------
DNA (498bp)
protein (166aa)
id=5046787 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5046787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2519_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8707..9774
-----------------
DNA (1068bp)
protein (356aa)
transmembrane_regions Tax=CG_Woesearch_02
transmembrane_regions id=5041857 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2519_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10003..10485
-----------------
DNA (483bp)
protein (161aa)
id=5046785 Tax=CG_Woesearch_02
id=5046785 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2519_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10475..10972
-----------------
DNA (498bp)
protein (166aa)
id=5046784 Tax=CG_Woesearch_02
id=5046784 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2519_8
unknown

Not on your lists

11004..12740
-----------------
DNA (1737bp)
protein (579aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2519_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12737..13642)
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein
phosphate uptake regulator Tax=AR17
phosphate uptake regulator id=5047140 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_2519_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

13767..14237
-----------------
DNA (471bp)
protein (157aa)
AsnC family transcriptional regulator
AsnC family transcriptional regulator Tax=RBG_13_Woesearchaeota_36_6_curated
Transcriptional regulator, AsnC family id=5800646 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2519_11
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(14412..15584)
-----------------
DNA (1173bp)
protein (391aa)
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000255|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000255|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000255|HAMAP-Rule:MF_00020}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyogloma
Acetate kinase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=ACKA_DICT6
rifcsphigho2_02_scaffold_2519_12

Not on your lists

15740..16543
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_2519_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(16704..17762)
-----------------
DNA (1059bp)
protein (353aa)
cell division protein pelota Tax=CG_Woesearch_02
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cell division protein
rifcsphigho2_02_scaffold_2519_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18027..19226
-----------------
DNA (1200bp)
protein (400aa)
hypothetical protein
id=5046362 Tax=CG_Woesearch_02
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2519_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19411..21453
-----------------
DNA (2043bp)
protein (681aa)
Marine sediment metagenome DNA, contig: S01H1_S30364 Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_2519_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21458..22432
-----------------
DNA (975bp)
protein (325aa)
PROKAR_LIPOPROTEIN Tax=CG_Woesearch_02
PROKAR_LIPOPROTEIN id=5800185 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2519_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22669..23613
-----------------
DNA (945bp)
protein (315aa)
PROKAR_LIPOPROTEIN Tax=CG_Woesearch_02
id=5046358 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2519_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23588..24598
-----------------
DNA (1011bp)
protein (337aa)
id=5800187 Tax=CG_Woesearch_02
id=5800187 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2519_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24715..25785)
-----------------
DNA (1071bp)
protein (357aa)
PepQ-2 cobalt-dependent proline dipeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] id=5041800 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Xaa-Pro aminopeptidase Tax=AR11
Xaa-Pro aminopeptidase
rifcsphigho2_02_scaffold_2519_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(25789..26865)
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Woesearch_01
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Uncharacterized protein id=5800116 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_2519_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

26982..27242
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5046354 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PRC-barrel protein
rifcsphigho2_02_scaffold_2519_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

27383..27793
-----------------
DNA (411bp)
protein (137aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Woesearch_02
rfc; replication factor C small subunit
Displaying 22 items

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