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rifcsphigho2_02_scaffold_2556

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2556_1
unknown

Not on your lists

comp(1..216)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2556_2

Not on your lists

342..1436
-----------------
DNA (1095bp)
protein (365aa)
geranylgeranyl reductase id=5045950 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase {ECO:0000313|EMBL:KHO46295.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Geranylgeranyl reductase
rifcsphigho2_02_scaffold_2556_3
unknown

Not on your lists

comp(1454..2950)
-----------------
DNA (1497bp)
protein (499aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2556_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

3003..5987
-----------------
DNA (2985bp)
protein (995aa)
Oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=CG_Woesearch_01
Oligosaccharyl transferase STT3 subunit id=5800039 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
oligosaccharyl transferase STT3 subunit
rifcsphigho2_02_scaffold_2556_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5971..6639
-----------------
DNA (669bp)
protein (223aa)
glycosyl transferase Tax=CG_Woesearch_02
family 2 glycosyl transferase id=5045944 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein 16
rifcsphigho2_02_scaffold_2556_6

Not on your lists

6640..6990
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein; K09153 hypothetical protein id=5045943 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46288.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_2556_7
R_OD1_Falkowbacteria_47_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6983..8272
-----------------
DNA (1290bp)
protein (430aa)
UDP-glucose/GDP-mannose dehydrogenase family protein (EC:1.1.1.-); K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_47_11b_curated
nucleotide sugar dehydrogenase (EC:1.1.1.1)
Nucleotide sugar dehydrogenase n=1 Tax=Clostridium sp. CAG:510 RepID=R6C4Q4_9CLOT
rifcsphigho2_02_scaffold_2556_8
GWE2_OD1_36_40, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

8276..9283
-----------------
DNA (1008bp)
protein (336aa)
eba:ebA1639 wcaG; nucleoside-diphosphate-sugar epimerase; K01795 [EC:5.1.3.-] id=84119 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
UDP glucuronic acid epimerase, extended SDR family {ECO:0000313|EMBL:KKQ06170.1}; TaxID=1618713 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_36_40.;"
UDP-glucuronate 4-epimerase
rifcsphigho2_02_scaffold_2556_9
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(9267..10568)
-----------------
DNA (1302bp)
protein (434aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=GWF2_Planctomycetes_40_8_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=5098268 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
rifcsphigho2_02_scaffold_2556_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10841..11677)
-----------------
DNA (837bp)
protein (279aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5F4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN26147.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source
rifcsphigho2_02_scaffold_2556_11

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11862..12479
-----------------
DNA (618bp)
protein (206aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NCT6_9EURY
Marine sediment metagenome DNA, contig: S01H1_S30658 {ECO:0000313|EMBL:GAG32627.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_02_scaffold_2556_12
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

12479..12730
-----------------
DNA (252bp)
protein (84aa)
id=5046581 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=GWA1_Berkelbacteria_36_10
rifcsphigho2_02_scaffold_2556_13
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(12949..14484)
-----------------
DNA (1536bp)
protein (512aa)
Predicted Fe-S cluster-binding oxidoreductase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7F7_UNCMA
Fe-S cluster-binding oxidoreductase Tax=GWF1_Spirochaetes_41_5_curated
Fe-S cluster-binding oxidoreductase
rifcsphigho2_02_scaffold_2556_14
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

14658..14879
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S250_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC66541.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strai
rifcsphigho2_02_scaffold_2556_15
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14881..16254
-----------------
DNA (1374bp)
protein (458aa)
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RBG_13_Pacearchaeota_33_26_curated
Phosphodiesterase/nucleotide pyrophosphatase id=4907891 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
rifcsphigho2_02_scaffold_2556_16
unknown

Not on your lists

16254..17351
-----------------
DNA (1098bp)
protein (366aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2556_17
unknown

Not on your lists

17358..18452
-----------------
DNA (1095bp)
protein (365aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2556_18
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


18442..19752
-----------------
DNA (1311bp)
protein (437aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
Proline--tRNA ligase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3M5_THEOJ
prolyl-tRNA synthetase
rifcsphigho2_02_scaffold_2556_19
Caldicellulosiruptor obsidiansis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19712..20671
-----------------
DNA (960bp)
protein (320aa)
phosphoesterase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B79FAD
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ADL43009.1}; TaxID=608506 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosirupto
rifcsphigho2_02_scaffold_2556_20
unknown

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20675..20866
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2556_21
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

20871..22199
-----------------
DNA (1329bp)
protein (443aa)
Sulfatase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8C5_HALXS
Arylsulfatase A {ECO:0000313|EMBL:AKG91249.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
sulfatase
rifcsphigho2_02_scaffold_2556_22

Not on your lists

comp(22196..23749)
-----------------
DNA (1554bp)
protein (518aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRW4_METAC id=5103373 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AJF62654.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2556_23

Not on your lists

comp(23739..25304)
-----------------
DNA (1566bp)
protein (522aa)
Putative Glycosyl transferase family 39 n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H6I4_MICAE
Uncharacterized protein {ECO:0000313|EMBL:KHO48902.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
glycosyl transferase family protein
rifcsphigho2_02_scaffold_2556_24
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25849..26580
-----------------
DNA (732bp)
protein (244aa)
Glycosyl transferase family 2 Tax=GWA2_OD1_40_9
family 2 glycosyl transferase id=5049555 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferases involved in cell wall biogenesis
rifcsphigho2_02_scaffold_2556_25
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26583..27545
-----------------
DNA (963bp)
protein (321aa)
Hypothetical membrane protein n=1 Tax=Thermococcus sp. AM4 RepID=B7R406_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS32791.1}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatolerans (s
rifcsphigho2_02_scaffold_2556_26
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

27542..28462
-----------------
DNA (921bp)
protein (307aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YD35_DICT6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
hypothetical protein
rifcsphigho2_02_scaffold_2556_27
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

28573..29691
-----------------
DNA (1119bp)
protein (373aa)
GDSL-like Lipase/Acylhydrolase family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QHF0_9CYAN
hypothetical protein
Putative uncharacterized protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
rifcsphigho2_02_scaffold_2556_28
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(29675..30775)
-----------------
DNA (1101bp)
protein (367aa)
Glycosyltransferase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UF76_SPIAZ
Glycosyl transferase, group 1 {ECO:0000313|EMBL:AHJ31299.1}; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
glycosyltransferase
rifcsphigho2_02_scaffold_2556_29
R_RIF_OD1_10_44_22b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(30772..31518)
-----------------
DNA (747bp)
protein (249aa)
Methyltransferase type 11 n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9W7_NITWC
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_44_22b_curated
methyltransferase type 11
rifcsphigho2_02_scaffold_2556_30
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(31525..32262)
-----------------
DNA (738bp)
protein (246aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13 5.4.2.8)
Nucleoside-diphosphate-sugar pyrophosphorylase fused to phosphomannomutase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DKV7_BACAZ
mannose-1-phosphate guanyltransferase Tax=GWA2_WOR_2_47_8_curated
Displaying items 1-30 of 44 in total

View Taxonomy